STRINGSTRING
ADE86223.1 ADE86223.1 hemN2 hemN2 ADE86222.1 ADE86222.1 ccoQ ccoQ ADE84914.1 ADE84914.1 ADE85106.1 ADE85106.1 ccoH ccoH ADE85107.1 ADE85107.1 dksA1 dksA1 ADE84465.1 ADE84465.1 rpoC rpoC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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[Homology]
Score
ADE86223.1Transcriptional regulator, Crp/Fnr family. (248 aa)    
Predicted Functional Partners:
hemN2
Oxygen-independent coproporphyrinogen-III oxidase-2; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.778
ADE86222.1
Conserved hypothetical protein.
       0.773
ccoQ
Cytochrome c oxidase, Cbb3-type, subunit IV.
 
  
 0.721
ADE84914.1
UspA domain protein.
 
  
 0.690
ADE85106.1
Adenylate/guanylate cyclase/CHASE2 sensor domain protein.
  
 0.569
ccoH
Cytochrome c oxidase, Cbb3-type, biogenesis protein CcoH.
 
    0.474
ADE85107.1
Transcriptional regulator, Crp/Fnr family.
  
   
 0.470
dksA1
DnaK suppressor protein-1; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
   
  
 0.446
ADE84465.1
Membrane protein, putative.
   
 0.442
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.435
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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