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dctP3 dctP3 dctQ3 dctQ3 dctM3 dctM3 dctP2 dctP2 dctR3 dctR3 dctS3 dctS3 dctM1 dctM1 dctM2 dctM2 ADE86751.1 ADE86751.1 ADE86752.1 ADE86752.1 pgl pgl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctP3TRAP dicarboxylate transporter, DctP-3 subunit. (333 aa)    
Predicted Functional Partners:
dctQ3
Tripartite ATP-independent periplasmic transporter, DctQ-3 component.
 
  
 0.970
dctM3
TRAP C4-dicarboxylate transport system permease, DctM-3 subunit.
  
 0.963
dctP2
TRAP dicarboxylate transporter, DctP-2 subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.856
dctR3
C4-dicarboxylate transport transcriptional regulatory protein DctR-3.
 
   
 0.749
dctS3
C4-dicarboxylate transport sensor protein DctS-3.
 
   
 0.683
dctM1
TRAP C4-dicarboxylate transport system permease, DctM-1 subunit.
   
 0.532
dctM2
TRAP C4-dicarboxylate transport system permease, DctM-2 subunit.
   
 0.523
ADE86751.1
Radical SAM family protein.
       0.453
ADE86752.1
Conserved hypothetical protein.
       0.453
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
      
 0.434
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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