Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHEA-2 | CHEV_1-2 | WS2083 | WS1787 | HISTIDINE KINASE. | CHEMOTAXIS PROTEIN. | 0.999 |
CHEA-2 | CHEW | WS2083 | WS1078 | HISTIDINE KINASE. | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | 0.999 |
CHEA-2 | WS0094 | WS2083 | WS0094 | HISTIDINE KINASE. | METHYL-ACCEPTING CHEMOTAXIS PROTEIN II. | 0.987 |
CHEA-2 | WS1213 | WS2083 | WS1213 | HISTIDINE KINASE. | PROTEIN-GLUTAMATE METHYLESTERASE. | 0.999 |
CHEA-2 | WS1869 | WS2083 | WS1869 | HISTIDINE KINASE. | CHEMOTAXIS PROTEIN CHEV-CheY like receiver domain. | 0.999 |
CHEA-2 | WS2082 | WS2083 | WS2082 | HISTIDINE KINASE. | PURINE-BINDING CHEMOTAXIS PROTEIN CHEW. | 0.999 |
CHEA-2 | cheA | WS2083 | WS0975 | HISTIDINE KINASE. | TWO-COMPONENT HYBRID HISTIDINE KINASE. | 0.994 |
CHEA-2 | cheR | WS2083 | WS1212 | HISTIDINE KINASE. | RESPONSE REGULATOR FOR CHEMOTAXIS, PROTEIN GLUTAMATEMETHYLTRANSFERASE. | 0.962 |
CHEA-2 | cheV | WS2083 | WS0095 | HISTIDINE KINASE. | Hypothetical protein. | 0.995 |
CHEV_1-2 | CHEA-2 | WS1787 | WS2083 | CHEMOTAXIS PROTEIN. | HISTIDINE KINASE. | 0.999 |
CHEV_1-2 | CHEW | WS1787 | WS1078 | CHEMOTAXIS PROTEIN. | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | 0.771 |
CHEV_1-2 | WS0094 | WS1787 | WS0094 | CHEMOTAXIS PROTEIN. | METHYL-ACCEPTING CHEMOTAXIS PROTEIN II. | 0.913 |
CHEV_1-2 | WS0696 | WS1787 | WS0696 | CHEMOTAXIS PROTEIN. | PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. | 0.410 |
CHEV_1-2 | WS1213 | WS1787 | WS1213 | CHEMOTAXIS PROTEIN. | PROTEIN-GLUTAMATE METHYLESTERASE. | 0.917 |
CHEV_1-2 | WS1869 | WS1787 | WS1869 | CHEMOTAXIS PROTEIN. | CHEMOTAXIS PROTEIN CHEV-CheY like receiver domain. | 0.818 |
CHEV_1-2 | WS2082 | WS1787 | WS2082 | CHEMOTAXIS PROTEIN. | PURINE-BINDING CHEMOTAXIS PROTEIN CHEW. | 0.869 |
CHEV_1-2 | cheA | WS1787 | WS0975 | CHEMOTAXIS PROTEIN. | TWO-COMPONENT HYBRID HISTIDINE KINASE. | 0.995 |
CHEV_1-2 | cheR | WS1787 | WS1212 | CHEMOTAXIS PROTEIN. | RESPONSE REGULATOR FOR CHEMOTAXIS, PROTEIN GLUTAMATEMETHYLTRANSFERASE. | 0.802 |
CHEV_1-2 | cheV | WS1787 | WS0095 | CHEMOTAXIS PROTEIN. | Hypothetical protein. | 0.819 |
CHEW | CHEA-2 | WS1078 | WS2083 | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | HISTIDINE KINASE. | 0.999 |
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