STRINGSTRING
BIOB BIOB bioD bioD BIOA BIOA BIOF BIOF BIRA BIRA TOPA TOPA RBN RBN GLCD GLCD argD argD FLAG FLAG UAHA UAHA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BIOBBIOTIN SYNTHASE; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (279 aa)    
Predicted Functional Partners:
bioD
Putative Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
 
 
 0.997
BIOA
ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.996
BIOF
7-KETO-8-AMINOPELARGONIC ACID SYNTHETASE PUTATIVE 8-AMINO-7-OXONONANOATE SYNTHASE.
  
 0.978
BIRA
PUTATIVE BIOTIN--[ACETYL-COA-CARBOXYLASE] SYNTHETASE.
  
 
 0.939
TOPA
DNA TOPOISOMERASE; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]
     
 0.836
RBN
PUTATIVE RIBONUCLEASE BN EC 3.1.
       0.783
GLCD
GLYCOLATE OXIDASE SUBUNIT GLCD.
 
    
 0.611
argD
SUCCINYLORNITHINE TRANSAMINASE; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 
  
 0.587
FLAG
FLAGELLIN; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
    0.530
UAHA
UREA AMIDOLYASE-RELATED PROTEIN.
  
  
 0.511
Your Current Organism:
Wolinella succinogenes
NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740
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