Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHEA-2 | CHEV | WS2083 | WS2084 | HISTIDINE KINASE. | CHEMOTAXIS PROTEIN EC 2.7.3. | 0.999 |
CHEA-2 | CHEW | WS2083 | WS1078 | HISTIDINE KINASE. | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | 0.999 |
CHEA-2 | WS1672 | WS2083 | WS1672 | HISTIDINE KINASE. | MCP-DOMAIN SIGNAL TRANSDUCTION PROTEIN. | 0.961 |
CHEA-2 | WS1869 | WS2083 | WS1869 | HISTIDINE KINASE. | CHEMOTAXIS PROTEIN CHEV-CheY like receiver domain. | 0.999 |
CHEA-2 | WS2082 | WS2083 | WS2082 | HISTIDINE KINASE. | PURINE-BINDING CHEMOTAXIS PROTEIN CHEW. | 0.999 |
CHEV | CHEA-2 | WS2084 | WS2083 | CHEMOTAXIS PROTEIN EC 2.7.3. | HISTIDINE KINASE. | 0.999 |
CHEV | CHEW | WS2084 | WS1078 | CHEMOTAXIS PROTEIN EC 2.7.3. | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | 0.824 |
CHEV | WS0696 | WS2084 | WS0696 | CHEMOTAXIS PROTEIN EC 2.7.3. | PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. | 0.410 |
CHEV | WS1338 | WS2084 | WS1338 | CHEMOTAXIS PROTEIN EC 2.7.3. | PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. | 0.410 |
CHEV | WS1672 | WS2084 | WS1672 | CHEMOTAXIS PROTEIN EC 2.7.3. | MCP-DOMAIN SIGNAL TRANSDUCTION PROTEIN. | 0.834 |
CHEV | WS1673 | WS2084 | WS1673 | CHEMOTAXIS PROTEIN EC 2.7.3. | SIGNAL-TRANSDUCTION SENSOR PROTEIN-PAS/PAC domain. | 0.410 |
CHEV | WS1869 | WS2084 | WS1869 | CHEMOTAXIS PROTEIN EC 2.7.3. | CHEMOTAXIS PROTEIN CHEV-CheY like receiver domain. | 0.817 |
CHEV | WS2025 | WS2084 | WS2025 | CHEMOTAXIS PROTEIN EC 2.7.3. | PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. | 0.410 |
CHEV | WS2082 | WS2084 | WS2082 | CHEMOTAXIS PROTEIN EC 2.7.3. | PURINE-BINDING CHEMOTAXIS PROTEIN CHEW. | 0.953 |
CHEW | CHEA-2 | WS1078 | WS2083 | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | HISTIDINE KINASE. | 0.999 |
CHEW | CHEV | WS1078 | WS2084 | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | CHEMOTAXIS PROTEIN EC 2.7.3. | 0.824 |
CHEW | WS1672 | WS1078 | WS1672 | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | MCP-DOMAIN SIGNAL TRANSDUCTION PROTEIN. | 0.803 |
CHEW | WS1869 | WS1078 | WS1869 | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | CHEMOTAXIS PROTEIN CHEV-CheY like receiver domain. | 0.836 |
CHEW | WS2082 | WS1078 | WS2082 | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | PURINE-BINDING CHEMOTAXIS PROTEIN CHEW. | 0.927 |
WS0696 | CHEV | WS0696 | WS2084 | PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. | CHEMOTAXIS PROTEIN EC 2.7.3. | 0.410 |
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