Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BL03174 | cheA | BL03174 | BL01250 | Two-component sensor histidine kinase. | Two-component sensor histidine kinase CheA. | 0.879 |
BL03174 | cheB | BL03174 | BL01251 | Two-component sensor histidine kinase. | Protein-glutamate methylesterase/protein-glutamine glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.915 |
BL03174 | cheD | BL03174 | BL01247 | Two-component sensor histidine kinase. | CheD chemotaxis protein; Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase (By similarity). | 0.789 |
BL03174 | cheR | BL03174 | BL02780 | Two-component sensor histidine kinase. | Methyl-accepting chemotaxis proteins (MCPs) methyltransferase. | 0.987 |
BL03174 | cheV | BL03174 | BL03579 | Two-component sensor histidine kinase. | CheV. | 0.999 |
BL03174 | cheW | BL03174 | BL01249 | Two-component sensor histidine kinase. | CheW chemotaxis protein. | 0.884 |
BL03174 | cheY | BL03174 | BL01260 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.961 |
BL03174 | tlpA | BL03174 | BL01850 | Two-component sensor histidine kinase. | Methyl-accepting chemotaxis protein. | 0.835 |
BL03174 | yclK | BL03174 | BL00655 | Two-component sensor histidine kinase. | Two-component sensor histidine kinase YclK. | 0.976 |
cheA | BL03174 | BL01250 | BL03174 | Two-component sensor histidine kinase CheA. | Two-component sensor histidine kinase. | 0.879 |
cheA | cheB | BL01250 | BL01251 | Two-component sensor histidine kinase CheA. | Protein-glutamate methylesterase/protein-glutamine glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
cheA | cheC | BL01250 | BL01248 | Two-component sensor histidine kinase CheA. | CheC chemotaxis protein. | 0.993 |
cheA | cheD | BL01250 | BL01247 | Two-component sensor histidine kinase CheA. | CheD chemotaxis protein; Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase (By similarity). | 0.990 |
cheA | cheR | BL01250 | BL02780 | Two-component sensor histidine kinase CheA. | Methyl-accepting chemotaxis proteins (MCPs) methyltransferase. | 0.983 |
cheA | cheV | BL01250 | BL03579 | Two-component sensor histidine kinase CheA. | CheV. | 0.999 |
cheA | cheW | BL01250 | BL01249 | Two-component sensor histidine kinase CheA. | CheW chemotaxis protein. | 0.999 |
cheA | cheY | BL01250 | BL01260 | Two-component sensor histidine kinase CheA. | Two-component response regulator. | 0.994 |
cheA | tlpA | BL01250 | BL01850 | Two-component sensor histidine kinase CheA. | Methyl-accepting chemotaxis protein. | 0.965 |
cheA | yclK | BL01250 | BL00655 | Two-component sensor histidine kinase CheA. | Two-component sensor histidine kinase YclK. | 0.866 |
cheB | BL03174 | BL01251 | BL03174 | Protein-glutamate methylesterase/protein-glutamine glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | Two-component sensor histidine kinase. | 0.915 |
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