STRINGSTRING
rsbX rsbX rsbS rsbS rsbR rsbR rsbT rsbT rsbW rsbW yqhA yqhA rsbU rsbU sigB sigB sigF sigF BL03174 BL03174 rsbV rsbV
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbXSerine phosphatase. (199 aa)    
Predicted Functional Partners:
rsbS
Antagonist of RsbT.
 
 0.993
rsbR
RbsR.
 
 0.992
rsbT
Switch protein/serine-threonine kinase.
 
 0.989
rsbW
Switch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein); Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
 
 0.983
yqhA
Putative sulphate transporter YqhA.
 
 0.964
rsbU
Serine phosphatase.
 
   
 0.922
sigB
RNA polymerase sigma-37 factor (sigma-B); Belongs to the sigma-70 factor family.
 
 
 0.876
sigF
RNA polymerase sporulation-specific sigma factor (sigma-F); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.841
BL03174
Two-component sensor histidine kinase.
  
 
 0.820
rsbV
Anti-anti-sigma factor (antagonist of RsbW); Belongs to the anti-sigma-factor antagonist family.
     
 0.811
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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