node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBta_0798 | BBta_0799 | BBta_0798 | BBta_0799 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative metallo-hydrolase/oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.974 |
BBta_0798 | BBta_0802 | BBta_0798 | BBta_0802 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | ATP dependent helicase, Lhr family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.845 |
BBta_0798 | BBta_0803 | BBta_0798 | BBta_0803 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Hypothetical protein; ICC-like phosphoesterase domain; Evidence: Similar to previously reported genes of unknown function. | 0.870 |
BBta_0798 | BBta_6329 | BBta_0798 | BBta_6329 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Bifunctional non-homologous end joining protein LigD; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.681 |
BBta_0798 | dnaN | BBta_0798 | BBta_0002 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.948 |
BBta_0798 | ku | BBta_0798 | BBta_3065 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.638 |
BBta_0798 | ku-2 | BBta_0798 | BBta_3324 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.639 |
BBta_0798 | ku-3 | BBta_0798 | BBta_6331 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.635 |
BBta_0798 | ligA-2 | BBta_0798 | BBta_6162 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | DNA ligase (Polydeoxyribonucleotide synthase (NAD+)); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.917 |
BBta_0798 | polA | BBta_0798 | BBta_7357 | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.884 |
BBta_0799 | BBta_0798 | BBta_0799 | BBta_0798 | Putative metallo-hydrolase/oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.974 |
BBta_0799 | BBta_0802 | BBta_0799 | BBta_0802 | Putative metallo-hydrolase/oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | ATP dependent helicase, Lhr family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.845 |
BBta_0799 | BBta_0803 | BBta_0799 | BBta_0803 | Putative metallo-hydrolase/oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Hypothetical protein; ICC-like phosphoesterase domain; Evidence: Similar to previously reported genes of unknown function. | 0.839 |
BBta_0799 | BBta_6329 | BBta_0799 | BBta_6329 | Putative metallo-hydrolase/oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Bifunctional non-homologous end joining protein LigD; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.705 |
BBta_0799 | polA | BBta_0799 | BBta_7357 | Putative metallo-hydrolase/oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.826 |
BBta_0802 | BBta_0798 | BBta_0802 | BBta_0798 | ATP dependent helicase, Lhr family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.845 |
BBta_0802 | BBta_0799 | BBta_0802 | BBta_0799 | ATP dependent helicase, Lhr family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative metallo-hydrolase/oxidoreductase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.845 |
BBta_0802 | BBta_0803 | BBta_0802 | BBta_0803 | ATP dependent helicase, Lhr family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Hypothetical protein; ICC-like phosphoesterase domain; Evidence: Similar to previously reported genes of unknown function. | 0.952 |
BBta_0802 | BBta_6329 | BBta_0802 | BBta_6329 | ATP dependent helicase, Lhr family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Bifunctional non-homologous end joining protein LigD; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.400 |
BBta_0803 | BBta_0798 | BBta_0803 | BBta_0798 | Hypothetical protein; ICC-like phosphoesterase domain; Evidence: Similar to previously reported genes of unknown function. | Putative DNA ligase, ATP-dependent; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.870 |