STRINGSTRING
BBta_0933 BBta_0933 BBta_0934 BBta_0934 BBta_0932 BBta_0932 BBta_0930 BBta_0930 BBta_2860 BBta_2860 BBta_4104 BBta_4104
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_0933Hypothetical protein; NUDIX hydrolase domain; Evidence: Similar to previously reported genes of unknown function. (209 aa)    
Predicted Functional Partners:
BBta_0934
Evidence: Similar to previously reported genes of unknown function.
       0.701
BBta_0932
Hypothetical protein; Thioesterase domain; Evidence: Similar to previously reported genes of unknown function.
       0.577
BBta_0930
Hypothetical protein; Cellulose synthase domain; Evidence: Similar to previously reported genes of unknown function.
 
     0.431
BBta_2860
Putative epoxide hydrolase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.406
BBta_4104
Putative epoxide hydrolase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
    0.401
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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