node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKO_00248 | CKO_03991 | CKO_00248 | CKO_03991 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; KEGG: yps:YPTB1073 4.5e-152 putative myo-inositol 2-dehydrogenase K00010; COG: COG0673 Predicted dehydrogenases and related proteins. | 0.910 |
CKO_00248 | nusA | CKO_00248 | CKO_04570 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Participates in both transcription termination and antitermination. | 0.725 |
CKO_00248 | nusB | CKO_00248 | CKO_02745 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.757 |
CKO_00248 | nusG | CKO_00248 | CKO_03008 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase (RNAP), probably by partially suppressing pausing. In the presence of Rho, modulates most Rho-dependent termination events by interacting with the RNAP to render the complex more susceptible to the termination activity of Rho. May be required to overcome a kinetic limitation of Rho to function at certain terminators. Also involved in ribosomal RNA transcriptional antitermination; Belongs to the NusG [...] | 0.782 |
CKO_00248 | rfaH | CKO_00248 | CKO_00183 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component RNA polymerase complex by the ops element, which is a short conserved DNA sequence located downstream of the main promoter of these operons. Once bound, RfaH suppresses pausing and inhibits Rho-dependent and intrinsic termination at a subset of sites. Termination signals are bypassed, which allows complete synthesis of long RNA chains. | 0.709 |
CKO_00248 | rpoB | CKO_00248 | CKO_03002 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.694 |
CKO_00248 | rpoC | CKO_00248 | CKO_03001 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.694 |
CKO_00248 | rpoZ | CKO_00248 | CKO_05106 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.736 |
CKO_00248 | rpsJ | CKO_00248 | CKO_04739 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.713 |
CKO_00248 | rsmB | CKO_00248 | CKO_04701 | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.769 |
CKO_03991 | CKO_00248 | CKO_03991 | CKO_00248 | Hypothetical protein; KEGG: yps:YPTB1073 4.5e-152 putative myo-inositol 2-dehydrogenase K00010; COG: COG0673 Predicted dehydrogenases and related proteins. | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | 0.910 |
nusA | CKO_00248 | CKO_04570 | CKO_00248 | Hypothetical protein; Participates in both transcription termination and antitermination. | Hypothetical protein; KEGG: stm:STM2546 4.2e-133 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092; COG: COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; Psort location: Cytoplasmic, score:8.96. | 0.725 |
nusA | nusB | CKO_04570 | CKO_02745 | Hypothetical protein; Participates in both transcription termination and antitermination. | Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.878 |
nusA | nusG | CKO_04570 | CKO_03008 | Hypothetical protein; Participates in both transcription termination and antitermination. | Hypothetical protein; Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase (RNAP), probably by partially suppressing pausing. In the presence of Rho, modulates most Rho-dependent termination events by interacting with the RNAP to render the complex more susceptible to the termination activity of Rho. May be required to overcome a kinetic limitation of Rho to function at certain terminators. Also involved in ribosomal RNA transcriptional antitermination; Belongs to the NusG [...] | 0.985 |
nusA | rfaH | CKO_04570 | CKO_00183 | Hypothetical protein; Participates in both transcription termination and antitermination. | Hypothetical protein; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component RNA polymerase complex by the ops element, which is a short conserved DNA sequence located downstream of the main promoter of these operons. Once bound, RfaH suppresses pausing and inhibits Rho-dependent and intrinsic termination at a subset of sites. Termination signals are bypassed, which allows complete synthesis of long RNA chains. | 0.947 |
nusA | rpoB | CKO_04570 | CKO_03002 | Hypothetical protein; Participates in both transcription termination and antitermination. | Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
nusA | rpoC | CKO_04570 | CKO_03001 | Hypothetical protein; Participates in both transcription termination and antitermination. | Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
nusA | rpoZ | CKO_04570 | CKO_05106 | Hypothetical protein; Participates in both transcription termination and antitermination. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.939 |
nusA | rpsJ | CKO_04570 | CKO_04739 | Hypothetical protein; Participates in both transcription termination and antitermination. | Hypothetical protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.968 |
nusA | rsmB | CKO_04570 | CKO_04701 | Hypothetical protein; Participates in both transcription termination and antitermination. | Hypothetical protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.864 |