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icfG icfG spoIIAA spoIIAA flgJ flgJ BaeS-2 BaeS-2 SpoIIAA SpoIIAA XOO3246 XOO3246 BaeS-6 BaeS-6 AtoC-3 AtoC-3 tsr-4 tsr-4 fliM fliM fliG fliG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icfGIcfG protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (668 aa)    
Predicted Functional Partners:
spoIIAA
Anti-sigma F factor antagonist; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.986
flgJ
Flagellar protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
    0.938
BaeS-2
Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.914
SpoIIAA
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.858
XOO3246
Phosphodiesterase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.744
BaeS-6
Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.740
AtoC-3
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.736
tsr-4
Chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.714
fliM
Flagellar protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.700
fliG
Flagellar protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.694
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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