gmhA protein (Bradyrhizobium sp. BTAi1)

STRING 9.05

gmhA protein (Bradyrhizobium sp. BTAi1) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	gmhA	phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (By similarity) (198 aa)
		(Bradyrhizobium sp. BTAi1)
Predicted Functional Partners:
	hldE	D-beta-D-heptose 1-phosphate adenylyltransferase; Catalyzes the phosphorylation of D-glycero-D- [...] (490 aa)	•		•	•	•	0.998
	BBta_5672	D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase (175 aa)	•	•	•		•	0.998
	rfaF	ADP-heptose--LPS heptosyltransferase II (354 aa)	•		•		•	0.979
	rfaD	ADP-glyceromanno-heptose 6-epimerase precursor; Catalyzes the interconversion between ADP-D-gly [...] (326 aa)	•		•		•	0.933
	BBta_5631	putative sugar kinase /cytidylyltransferase; Catalyzes the ADP transfer to D-glycero-D-manno-he [...] (501 aa)	•		•			0.661
	lpxB	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosa [...] (397 aa)	•				•	0.623
	BBta_5632	putative sugar-phosphate nucleotidyl transferase (240 aa)	•					0.602
	rfbA	glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP a [...] (296 aa)	•				•	0.587
	BBta_0181	hypothetical protein (136 aa)	•				•	0.578
	lpxC	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (319 aa)			•		•	0.574

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: low (33%)

Permalink