Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Tbd_1562 | cbbL | Tbd_1562 | Tbd_2624 | Putative hydrolase. | Ribulose-bisphosphate carboxylase form I large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.903 |
| Tbd_1562 | cbbM | Tbd_1562 | Tbd_2638 | Putative hydrolase. | Ribulose-bisphosphate carboxylase form II; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.903 |
| Tbd_1562 | cbbS | Tbd_1562 | Tbd_2623 | Putative hydrolase. | Ribulose-bisphosphate carboxylase form I small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family. | 0.912 |
| Tbd_1562 | cbbZ | Tbd_1562 | Tbd_2229 | Putative hydrolase. | 2-phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.924 |
| Tbd_1955 | cbbL | Tbd_1955 | Tbd_2624 | Phosphoribulokinase-like protein. | Ribulose-bisphosphate carboxylase form I large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.969 |
| Tbd_1955 | cbbM | Tbd_1955 | Tbd_2638 | Phosphoribulokinase-like protein. | Ribulose-bisphosphate carboxylase form II; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.956 |
| Tbd_1955 | cbbP | Tbd_1955 | Tbd_2447 | Phosphoribulokinase-like protein. | Phosphoribulokinase. | 0.906 |
| Tbd_1955 | cbbS | Tbd_1955 | Tbd_2623 | Phosphoribulokinase-like protein. | Ribulose-bisphosphate carboxylase form I small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family. | 0.961 |
| Tbd_2599 | cbbL | Tbd_2599 | Tbd_2624 | Conserved hypothetical protein. | Ribulose-bisphosphate carboxylase form I large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.518 |
| Tbd_2599 | cbbO1 | Tbd_2599 | Tbd_2621 | Conserved hypothetical protein. | Rubisco activation protein CbbO. | 0.775 |
| Tbd_2599 | cbbS | Tbd_2599 | Tbd_2623 | Conserved hypothetical protein. | Ribulose-bisphosphate carboxylase form I small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family. | 0.760 |
| Tbd_2649 | cbbL | Tbd_2649 | Tbd_2624 | Carboxysome shell protein CsoS3, carbonic anhydrase epsilon. | Ribulose-bisphosphate carboxylase form I large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.474 |
| Tbd_2649 | cbbO1 | Tbd_2649 | Tbd_2621 | Carboxysome shell protein CsoS3, carbonic anhydrase epsilon. | Rubisco activation protein CbbO. | 0.401 |
| Tbd_2649 | cbbS | Tbd_2649 | Tbd_2623 | Carboxysome shell protein CsoS3, carbonic anhydrase epsilon. | Ribulose-bisphosphate carboxylase form I small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family. | 0.851 |
| cbbK | cbbL | Tbd_0161 | Tbd_2624 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Ribulose-bisphosphate carboxylase form I large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.912 |
| cbbK | cbbM | Tbd_0161 | Tbd_2638 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Ribulose-bisphosphate carboxylase form II; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.912 |
| cbbK | cbbS | Tbd_0161 | Tbd_2623 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Ribulose-bisphosphate carboxylase form I small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family. | 0.921 |
| cbbL | Tbd_1562 | Tbd_2624 | Tbd_1562 | Ribulose-bisphosphate carboxylase form I large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | Putative hydrolase. | 0.903 |
| cbbL | Tbd_1955 | Tbd_2624 | Tbd_1955 | Ribulose-bisphosphate carboxylase form I large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | Phosphoribulokinase-like protein. | 0.969 |
| cbbL | Tbd_2599 | Tbd_2624 | Tbd_2599 | Ribulose-bisphosphate carboxylase form I large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | Conserved hypothetical protein. | 0.518 |
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