STRINGSTRING
RAB5C RAB5C H0WXV6_OTOGA H0WXV6_OTOGA PIK3C3 PIK3C3 RBSN RBSN APPL2 APPL2 APPL1 APPL1 RIN1 RIN1 RABEP1 RABEP1 EEA1 EEA1 H0WZC7_OTOGA H0WZC7_OTOGA H0XQJ8_OTOGA H0XQJ8_OTOGA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB5CRAB5C, member RAS oncogene family. (216 aa)    
Predicted Functional Partners:
H0WXV6_OTOGA
Uncharacterized protein.
   
 0.974
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.963
RBSN
Rabenosyn, RAB effector.
   
 0.927
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
   
 
 0.919
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.918
RIN1
Ras and Rab interactor 1.
    
 0.902
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.901
EEA1
Early endosome antigen 1.
    
 0.887
H0WZC7_OTOGA
Ras-GAP domain-containing protein.
    
 0.879
H0XQJ8_OTOGA
VPS9 domain-containing protein.
    
 0.879
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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