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pdxH pdxH pdxJ pdxJ ELI_02990 ELI_02990 ELI_13445 ELI_13445 ELI_13440 ELI_13440 ELI_13430 ELI_13430 ELI_13425 ELI_13425 carB carB carA carA ribB ribB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdxHPyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (212 aa)    
Predicted Functional Partners:
pdxJ
Pyridoxal phosphate biosynthesis protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
  
  
 0.943
ELI_02990
Flavin Mononucleotide Binding Protein.
     
  0.900
ELI_13445
Hypothetical protein; COG0384 Predicted epimerase, PhzC/PhzF homolog.
  
    0.847
ELI_13440
Probable transporter; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.820
ELI_13430
Putative GDP-mannose pyrophosphorylase; COG0836 Mannose-1-phosphate guanylyltransferase.
       0.550
ELI_13425
Probable mannose-6-phosphate isomerase; COG1482 Phosphomannose isomerase.
       0.506
carB
COG0458 Carbamoylphosphate synthase large subunit; Belongs to the CarB family.
 
  
 0.493
carA
COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
 
     0.423
ribB
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
  
 0.414
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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