STRINGSTRING
ADM10097.1 ADM10097.1 ADM10523.1 ADM10523.1 ADM09375.1 ADM09375.1 ADM10177.1 ADM10177.1 ADM10176.1 ADM10176.1 ADM09657.1 ADM09657.1 ADM09175.1 ADM09175.1 ADM08211.1 ADM08211.1 ADM08542.1 ADM08542.1 ADM10100.1 ADM10100.1 gyrA gyrA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM10097.1Superoxide dismutase, Cu-Zn. (197 aa)    
Predicted Functional Partners:
ADM10523.1
Mercuric transport protein periplasmic component.
   
 0.992
ADM09375.1
Manganese superoxide dismutase Mn-SOD; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.843
ADM10177.1
PetB, ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.831
ADM10176.1
Putative ubiquinol-cytochrome c reductase iron-sulfur subunit protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.751
ADM09657.1
Hypothetical protein.
    
   0.737
ADM09175.1
TdcF protein.
  
 
   0.683
ADM08211.1
Hypothetical protein.
   
 0.676
ADM08542.1
Thiol:disulfide interchange protein DsbE.
   
 0.676
ADM10100.1
Glutathione S-transferase.
   
 
 0.580
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
       0.576
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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