Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RF_0561 | RF_0562 | RF_0561 | RF_0562 | Unknown. | Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.803 |
RF_0561 | mpg | RF_0561 | RF_0560 | Unknown. | DNA-3-methyladenine glycosidase; Belongs to the DNA glycosylase MPG family. | 0.774 |
RF_0561 | nuoE | RF_0561 | RF_0563 | Unknown. | NADH dehydrogenase I chain E; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity). | 0.517 |
RF_0561 | pheT | RF_0561 | RF_0648 | Unknown. | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.512 |
RF_0562 | RF_0561 | RF_0562 | RF_0561 | Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Unknown. | 0.803 |
RF_0562 | mpg | RF_0562 | RF_0560 | Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | DNA-3-methyladenine glycosidase; Belongs to the DNA glycosylase MPG family. | 0.774 |
RF_0562 | nuoE | RF_0562 | RF_0563 | Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | NADH dehydrogenase I chain E; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity). | 0.519 |
RF_0915 | dat | RF_0915 | RF_0916 | Methylated-DNA--protein-cysteine methyltransferase. | Methylated-DNA--protein-cysteine methyltransferase. | 0.949 |
RF_0915 | mpg | RF_0915 | RF_0560 | Methylated-DNA--protein-cysteine methyltransferase. | DNA-3-methyladenine glycosidase; Belongs to the DNA glycosylase MPG family. | 0.767 |
RF_0915 | pheT | RF_0915 | RF_0648 | Methylated-DNA--protein-cysteine methyltransferase. | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.576 |
RF_0915 | polA | RF_0915 | RF_1239 | Methylated-DNA--protein-cysteine methyltransferase. | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.873 |
RF_0915 | xth1 | RF_0915 | RF_1021 | Methylated-DNA--protein-cysteine methyltransferase. | Exodeoxyribonuclease III. | 0.672 |
RF_0915 | xth2 | RF_0915 | RF_0250 | Methylated-DNA--protein-cysteine methyltransferase. | Exodeoxyribonuclease III. | 0.672 |
dat | RF_0915 | RF_0916 | RF_0915 | Methylated-DNA--protein-cysteine methyltransferase. | Methylated-DNA--protein-cysteine methyltransferase. | 0.949 |
dat | mpg | RF_0916 | RF_0560 | Methylated-DNA--protein-cysteine methyltransferase. | DNA-3-methyladenine glycosidase; Belongs to the DNA glycosylase MPG family. | 0.767 |
dat | pheT | RF_0916 | RF_0648 | Methylated-DNA--protein-cysteine methyltransferase. | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.576 |
dat | polA | RF_0916 | RF_1239 | Methylated-DNA--protein-cysteine methyltransferase. | DNA polymerase I (POL I); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.873 |
dat | xth1 | RF_0916 | RF_1021 | Methylated-DNA--protein-cysteine methyltransferase. | Exodeoxyribonuclease III. | 0.672 |
dat | xth2 | RF_0916 | RF_0250 | Methylated-DNA--protein-cysteine methyltransferase. | Exodeoxyribonuclease III. | 0.672 |
mpg | RF_0561 | RF_0560 | RF_0561 | DNA-3-methyladenine glycosidase; Belongs to the DNA glycosylase MPG family. | Unknown. | 0.774 |
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