STRINGSTRING
RF_0769 RF_0769 queF queF RF_0310 RF_0310 himD himD cmk cmk sppA2 sppA2 RF_0768 RF_0768
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RF_0769Unknown; Belongs to the UPF0246 family. (248 aa)    
Predicted Functional Partners:
queF
Unknown; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
       0.545
RF_0310
Tetratricopeptide repeat domain containing protein.
       0.465
himD
Integration host factor beta-subunit; Belongs to the bacterial histone-like protein family.
       0.437
cmk
Cytidylate kinase.
       0.429
sppA2
Signal peptide peptidase SppA.
       0.414
RF_0768
Unknown.
       0.414
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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