STRINGSTRING
BPUM_0048 BPUM_0048 BPUM_1425 BPUM_1425 BPUM_0049 BPUM_0049 BPUM_0050 BPUM_0050 BPUM_3342 BPUM_3342 BPUM_2286 BPUM_2286 BPUM_1426 BPUM_1426 BPUM_2169 BPUM_2169 BPUM_2085 BPUM_2085 BPUM_3291 BPUM_3291 BPUM_2171 BPUM_2171
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPUM_0048Stage II sporulation protein E. (827 aa)    
Predicted Functional Partners:
BPUM_1425
Peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
  
  
 0.941
BPUM_0049
Hypothetical protein.
 
    0.936
BPUM_0050
Serine/threonine protein kinase.
 
 
 0.935
BPUM_3342
Stage II sporulation protein R.
  
   
 0.831
BPUM_2286
Stage II sporulation protein P.
  
   
 0.814
BPUM_1426
Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.802
BPUM_2169
Stage III sporulation protein AG.
  
   
 0.796
BPUM_2085
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
   
 0.781
BPUM_3291
Stage III sporulation protein D.
  
   
 0.780
BPUM_2171
Stage III sporulation protein AE.
  
     0.770
Your Current Organism:
Bacillus pumilus
NCBI taxonomy Id: 315750
Other names: B. pumilus SAFR-032, Bacillus pumilus SAFR-032, Bacillus pumilus str. SAFR-032, Bacillus pumilus strain SAFR-032
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