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pqqC pqqC pqqB pqqB pqqE pqqE pqqD pqqD RPD_3110 RPD_3110 RPD_4322 RPD_4322 RPD_4323 RPD_4323 RPD_2029 RPD_2029 RPD_3571 RPD_3571 RPD_4258 RPD_4258 RPD_0906 RPD_0906
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqqCCoenzyme PQQ biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. (251 aa)    
Predicted Functional Partners:
pqqB
Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
  
 0.997
pqqE
Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.981
pqqD
Coenzyme PQQ synthesis D; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.
 
  
 0.965
RPD_3110
Pyrrolo-quinoline quinone.
 
  
 0.822
RPD_4322
Radical SAM.
 
  
 0.778
RPD_4323
Radical SAM.
 
  
 0.757
RPD_2029
Hypothetical protein.
       0.536
RPD_3571
Radical SAM.
 
  
 0.511
RPD_4258
Protein of unknown function DUF336.
 
    0.510
RPD_0906
L-sorbosone dehydrogenase.
 
   
 0.440
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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