Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RPD_0724 | RPD_0808 | RPD_0724 | RPD_0808 | Glutathione S-transferase-like; Belongs to the GST superfamily. | Glutathione S-transferase-like. | 0.908 |
RPD_0724 | RPD_1703 | RPD_0724 | RPD_1703 | Glutathione S-transferase-like; Belongs to the GST superfamily. | Glutathione S-transferase-like. | 0.934 |
RPD_0724 | RPD_2057 | RPD_0724 | RPD_2057 | Glutathione S-transferase-like; Belongs to the GST superfamily. | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | 0.909 |
RPD_0724 | RPD_2668 | RPD_0724 | RPD_2668 | Glutathione S-transferase-like; Belongs to the GST superfamily. | Glutathione S-transferase-like; Belongs to the GST superfamily. | 0.905 |
RPD_0724 | RPD_3070 | RPD_0724 | RPD_3070 | Glutathione S-transferase-like; Belongs to the GST superfamily. | Glutathione S-transferase-like. | 0.901 |
RPD_0724 | RPD_3470 | RPD_0724 | RPD_3470 | Glutathione S-transferase-like; Belongs to the GST superfamily. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.909 |
RPD_0724 | RPD_3910 | RPD_0724 | RPD_3910 | Glutathione S-transferase-like; Belongs to the GST superfamily. | Glutathione S-transferase-like. | 0.948 |
RPD_0724 | RPD_3927 | RPD_0724 | RPD_3927 | Glutathione S-transferase-like; Belongs to the GST superfamily. | Glutathione S-transferase-like; Belongs to the GST superfamily. | 0.933 |
RPD_0724 | RPD_4027 | RPD_0724 | RPD_4027 | Glutathione S-transferase-like; Belongs to the GST superfamily. | Peroxiredoxin-like protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.926 |
RPD_0724 | gshB | RPD_0724 | RPD_0401 | Glutathione S-transferase-like; Belongs to the GST superfamily. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.905 |
RPD_0808 | RPD_0724 | RPD_0808 | RPD_0724 | Glutathione S-transferase-like. | Glutathione S-transferase-like; Belongs to the GST superfamily. | 0.908 |
RPD_0808 | RPD_1703 | RPD_0808 | RPD_1703 | Glutathione S-transferase-like. | Glutathione S-transferase-like. | 0.918 |
RPD_0808 | RPD_2057 | RPD_0808 | RPD_2057 | Glutathione S-transferase-like. | NADPH-glutathione reductase; Maintains high levels of reduced glutathione. | 0.925 |
RPD_0808 | RPD_2668 | RPD_0808 | RPD_2668 | Glutathione S-transferase-like. | Glutathione S-transferase-like; Belongs to the GST superfamily. | 0.908 |
RPD_0808 | RPD_3070 | RPD_0808 | RPD_3070 | Glutathione S-transferase-like. | Glutathione S-transferase-like. | 0.927 |
RPD_0808 | RPD_3470 | RPD_0808 | RPD_3470 | Glutathione S-transferase-like. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.919 |
RPD_0808 | RPD_3910 | RPD_0808 | RPD_3910 | Glutathione S-transferase-like. | Glutathione S-transferase-like. | 0.927 |
RPD_0808 | RPD_3927 | RPD_0808 | RPD_3927 | Glutathione S-transferase-like. | Glutathione S-transferase-like; Belongs to the GST superfamily. | 0.913 |
RPD_0808 | RPD_4027 | RPD_0808 | RPD_4027 | Glutathione S-transferase-like. | Peroxiredoxin-like protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.905 |
RPD_0808 | gshB | RPD_0808 | RPD_0401 | Glutathione S-transferase-like. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.926 |
page 1 of 6