Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RPB_1623 | RPB_3347 | RPB_1623 | RPB_3347 | L-threonine ammonia-lyase. | Phosphoserine phosphatase. | 0.924 |
| RPB_1623 | RPB_4318 | RPB_1623 | RPB_4318 | L-threonine ammonia-lyase. | Anthranilate synthase, component II / anthranilate synthase, component I. | 0.489 |
| RPB_1623 | RPB_4629 | RPB_1623 | RPB_4629 | L-threonine ammonia-lyase. | Serine--glyoxylate transaminase. | 0.940 |
| RPB_1623 | glyA | RPB_1623 | RPB_2634 | L-threonine ammonia-lyase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.930 |
| RPB_1623 | trpA | RPB_1623 | RPB_0634 | L-threonine ammonia-lyase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.933 |
| RPB_1623 | trpB | RPB_1623 | RPB_0635 | L-threonine ammonia-lyase. | Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.947 |
| RPB_1623 | trpB-2 | RPB_1623 | RPB_3714 | L-threonine ammonia-lyase. | Tryptophan synthase, beta chain-like; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.908 |
| RPB_3347 | RPB_1623 | RPB_3347 | RPB_1623 | Phosphoserine phosphatase. | L-threonine ammonia-lyase. | 0.924 |
| RPB_3347 | RPB_4629 | RPB_3347 | RPB_4629 | Phosphoserine phosphatase. | Serine--glyoxylate transaminase. | 0.938 |
| RPB_3347 | glyA | RPB_3347 | RPB_2634 | Phosphoserine phosphatase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.945 |
| RPB_3347 | trpA | RPB_3347 | RPB_0634 | Phosphoserine phosphatase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.907 |
| RPB_3347 | trpB | RPB_3347 | RPB_0635 | Phosphoserine phosphatase. | Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.929 |
| RPB_3347 | trpB-2 | RPB_3347 | RPB_3714 | Phosphoserine phosphatase. | Tryptophan synthase, beta chain-like; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.900 |
| RPB_4318 | RPB_1623 | RPB_4318 | RPB_1623 | Anthranilate synthase, component II / anthranilate synthase, component I. | L-threonine ammonia-lyase. | 0.489 |
| RPB_4318 | glyA | RPB_4318 | RPB_2634 | Anthranilate synthase, component II / anthranilate synthase, component I. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.579 |
| RPB_4318 | trpA | RPB_4318 | RPB_0634 | Anthranilate synthase, component II / anthranilate synthase, component I. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.978 |
| RPB_4318 | trpB | RPB_4318 | RPB_0635 | Anthranilate synthase, component II / anthranilate synthase, component I. | Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.978 |
| RPB_4318 | trpB-2 | RPB_4318 | RPB_3714 | Anthranilate synthase, component II / anthranilate synthase, component I. | Tryptophan synthase, beta chain-like; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.636 |
| RPB_4318 | trpC | RPB_4318 | RPB_2798 | Anthranilate synthase, component II / anthranilate synthase, component I. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.999 |
| RPB_4318 | trpD | RPB_4318 | RPB_2797 | Anthranilate synthase, component II / anthranilate synthase, component I. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
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