node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sfri_0022 | nusA | Sfri_0022 | Sfri_0989 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.935 |
Sfri_0022 | rlmG | Sfri_0022 | Sfri_3101 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.413 |
Sfri_0022 | rlmL | Sfri_0022 | Sfri_2661 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.529 |
Sfri_0022 | rplA | Sfri_0022 | Sfri_0138 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.485 |
Sfri_0022 | rpoB | Sfri_0022 | Sfri_0141 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.939 |
Sfri_0022 | rsmF | Sfri_0022 | Sfri_2236 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Putative RNA methylase, NOL1/NOP2/sun family protein; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA. | 0.456 |
Sfri_0022 | uppS | Sfri_0022 | Sfri_1274 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide. | 0.447 |
nusA | Sfri_0022 | Sfri_0989 | Sfri_0022 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.935 |
nusA | rlmG | Sfri_0989 | Sfri_3101 | NusA antitermination factor; Participates in both transcription termination and antitermination. | rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.458 |
nusA | rlmL | Sfri_0989 | Sfri_2661 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.450 |
nusA | rplA | Sfri_0989 | Sfri_0138 | NusA antitermination factor; Participates in both transcription termination and antitermination. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.932 |
nusA | rpoB | Sfri_0989 | Sfri_0141 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.994 |
nusA | rpsG | Sfri_0989 | Sfri_0144 | NusA antitermination factor; Participates in both transcription termination and antitermination. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.987 |
nusA | uppS | Sfri_0989 | Sfri_1274 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide. | 0.737 |
obg | rlmG | Sfri_3087 | Sfri_3101 | GTP1/OBG sub domain protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.598 |
obg | rplA | Sfri_3087 | Sfri_0138 | GTP1/OBG sub domain protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.909 |
rlmG | Sfri_0022 | Sfri_3101 | Sfri_0022 | rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.413 |
rlmG | nusA | Sfri_3101 | Sfri_0989 | rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.458 |
rlmG | obg | Sfri_3101 | Sfri_3087 | rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | GTP1/OBG sub domain protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.598 |
rlmG | rlmL | Sfri_3101 | Sfri_2661 | rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.483 |