Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CYA_1097 | CYA_2072 | CYA_1097 | CYA_2072 | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | 0.915 |
| CYA_1097 | CYA_2752 | CYA_1097 | CYA_2752 | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | Putative alpha-glucan phosphorylase; Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094. | 0.966 |
| CYA_1097 | glgA-1 | CYA_1097 | CYA_2071 | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.839 |
| CYA_1097 | glgA-2 | CYA_1097 | CYA_2648 | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.839 |
| CYA_1097 | glgB | CYA_1097 | CYA_2062 | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.978 |
| CYA_1097 | glgC | CYA_1097 | CYA_1562 | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | Glucose-1-phosphate adenylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR02091; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.539 |
| CYA_1097 | glgE | CYA_1097 | CYA_0263 | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.909 |
| CYA_1097 | glgP | CYA_1097 | CYA_2127 | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | Alpha-glucan phosphorylase; Identified by similarity to GB:CAA04523.1; match to protein family HMM PF00343; match to protein family HMM TIGR02094. | 0.966 |
| CYA_1097 | malQ | CYA_1097 | CYA_2436 | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | 4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217. | 0.961 |
| CYA_1969 | CYA_2752 | CYA_1969 | CYA_2752 | Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | Putative alpha-glucan phosphorylase; Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094. | 0.977 |
| CYA_1969 | glgB | CYA_1969 | CYA_2062 | Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.799 |
| CYA_1969 | glgC | CYA_1969 | CYA_1562 | Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | Glucose-1-phosphate adenylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR02091; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.933 |
| CYA_1969 | glgP | CYA_1969 | CYA_2127 | Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | Alpha-glucan phosphorylase; Identified by similarity to GB:CAA04523.1; match to protein family HMM PF00343; match to protein family HMM TIGR02094. | 0.977 |
| CYA_1969 | malQ | CYA_1969 | CYA_2436 | Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. | 4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217. | 0.923 |
| CYA_2072 | CYA_1097 | CYA_2072 | CYA_1097 | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | Trehalose synthase/putative maltokinase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. | 0.915 |
| CYA_2072 | CYA_2752 | CYA_2072 | CYA_2752 | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | Putative alpha-glucan phosphorylase; Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094. | 0.927 |
| CYA_2072 | glgA-1 | CYA_2072 | CYA_2071 | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.948 |
| CYA_2072 | glgA-2 | CYA_2072 | CYA_2648 | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.906 |
| CYA_2072 | glgB | CYA_2072 | CYA_2062 | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.917 |
| CYA_2072 | glgE | CYA_2072 | CYA_0263 | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | Alpha-amylase family protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.909 |
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