Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO76371.1 | ACO79428.1 | Avin_01040 | Avin_32710 | Conserved hypothetical protein. | Antisigma-factor antagonist STAS domain protein. | 0.667 |
ACO76371.1 | ACO79429.1 | Avin_01040 | Avin_32720 | Conserved hypothetical protein. | Response regulator. | 0.752 |
ACO76371.1 | ACO79584.1 | Avin_01040 | Avin_34350 | Conserved hypothetical protein. | Histidine-containing phosphotransfer protein. | 0.646 |
ACO76371.1 | ACO79586.1 | Avin_01040 | Avin_34370 | Conserved hypothetical protein. | Antisigma-factor antagonist STAS domain protein. | 0.546 |
ACO76371.1 | ACO80267.1 | Avin_01040 | Avin_41340 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
ACO77515.1 | ACO78703.1 | Avin_12890 | Avin_25190 | STAS family protein. | Cyclic di-GMP signal transduction protein. | 0.704 |
ACO77515.1 | ACO79429.1 | Avin_12890 | Avin_32720 | STAS family protein. | Response regulator. | 0.750 |
ACO77515.1 | ACO79584.1 | Avin_12890 | Avin_34350 | STAS family protein. | Histidine-containing phosphotransfer protein. | 0.419 |
ACO77515.1 | ACO81151.1 | Avin_12890 | Avin_50630 | STAS family protein. | Periplasmic hybrid histidine protein kinase, two-component. | 0.867 |
ACO77515.1 | flgJ | Avin_12890 | Avin_24080 | STAS family protein. | Flagellar rod assembly protein/muramidase. | 0.729 |
ACO77515.1 | gacS | Avin_12890 | Avin_37090 | STAS family protein. | Alginate regulatory hybrid histidine protein kinase GacS. | 0.832 |
ACO78703.1 | ACO77515.1 | Avin_25190 | Avin_12890 | Cyclic di-GMP signal transduction protein. | STAS family protein. | 0.704 |
ACO78703.1 | ACO79428.1 | Avin_25190 | Avin_32710 | Cyclic di-GMP signal transduction protein. | Antisigma-factor antagonist STAS domain protein. | 0.704 |
ACO78703.1 | ACO79429.1 | Avin_25190 | Avin_32720 | Cyclic di-GMP signal transduction protein. | Response regulator. | 0.782 |
ACO78703.1 | ACO79584.1 | Avin_25190 | Avin_34350 | Cyclic di-GMP signal transduction protein. | Histidine-containing phosphotransfer protein. | 0.760 |
ACO78703.1 | ACO79586.1 | Avin_25190 | Avin_34370 | Cyclic di-GMP signal transduction protein. | Antisigma-factor antagonist STAS domain protein. | 0.704 |
ACO78703.1 | ACO81151.1 | Avin_25190 | Avin_50630 | Cyclic di-GMP signal transduction protein. | Periplasmic hybrid histidine protein kinase, two-component. | 0.996 |
ACO78703.1 | flgJ | Avin_25190 | Avin_24080 | Cyclic di-GMP signal transduction protein. | Flagellar rod assembly protein/muramidase. | 0.640 |
ACO78703.1 | gacS | Avin_25190 | Avin_37090 | Cyclic di-GMP signal transduction protein. | Alginate regulatory hybrid histidine protein kinase GacS. | 0.978 |
ACO79428.1 | ACO76371.1 | Avin_32710 | Avin_01040 | Antisigma-factor antagonist STAS domain protein. | Conserved hypothetical protein. | 0.667 |
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