STRINGSTRING
Nwi_3040 Nwi_3040 Nwi_0957 Nwi_0957 Nwi_0259 Nwi_0259 Nwi_1744 Nwi_1744 Nwi_3032 Nwi_3032 Nwi_0119 Nwi_0119 Nwi_1012 Nwi_1012 Nwi_0500 Nwi_0500 Nwi_0749 Nwi_0749 Nwi_1029 Nwi_1029 Nwi_0086 Nwi_0086
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nwi_3040Adenylyl cyclase class-3/4/guanylyl cyclase. (815 aa)    
Predicted Functional Partners:
Nwi_0957
Transcriptional regulatory protein, LuxR family.
 
 
 0.906
Nwi_0259
Hypothetical protein.
   
 
 0.865
Nwi_1744
Signal transduction histidine kinase.
 
 
 0.829
Nwi_3032
Transcriptional regulator, Crp/Fnr family.
 
 0.807
Nwi_0119
Signal transduction histidine kinase.
 
 0.748
Nwi_1012
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.734
Nwi_0500
Diguanylate cyclase/phosphodiesterase.
 
 
 0.726
Nwi_0749
Signal transduction histidine kinase.
 
 0.718
Nwi_1029
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.718
Nwi_0086
Cyclic nucleotide-binding protein.
 
 0.713
Your Current Organism:
Nitrobacter winogradskyi
NCBI taxonomy Id: 323098
Other names: N. winogradskyi Nb-255, Nitrobacter winogradskyi Nb-255, Nitrobacter winogradskyi str. Nb-255, Nitrobacter winogradskyi strain Nb-255
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