Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mhun_1575 | queC | Mhun_1575 | Mhun_2833 | Cupin 2, conserved barrel. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.615 |
Mhun_2831 | Mhun_2834 | Mhun_2831 | Mhun_2834 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | NUDIX hydrolase. | 0.800 |
Mhun_2831 | Mhun_2835 | Mhun_2831 | Mhun_2835 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | Hypothetical protein. | 0.781 |
Mhun_2831 | argS | Mhun_2831 | Mhun_2837 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.612 |
Mhun_2831 | prf1 | Mhun_2831 | Mhun_2836 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | Peptide chain release factor subunit 1 (aeRF-1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. | 0.580 |
Mhun_2831 | queC | Mhun_2831 | Mhun_2833 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.993 |
Mhun_2831 | queE | Mhun_2831 | Mhun_2832 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | Radical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.999 |
Mhun_2831 | sepS | Mhun_2831 | Mhun_2839 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | phosphoserine-tRNA(Cys) ligase; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys). | 0.621 |
Mhun_2831 | taw1 | Mhun_2831 | Mhun_2838 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | Radical SAM; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe). | 0.626 |
Mhun_2831 | tgtA | Mhun_2831 | Mhun_1120 | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | Archaeosine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. | 0.566 |
Mhun_2834 | Mhun_2831 | Mhun_2834 | Mhun_2831 | NUDIX hydrolase. | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | 0.800 |
Mhun_2834 | Mhun_2835 | Mhun_2834 | Mhun_2835 | NUDIX hydrolase. | Hypothetical protein. | 0.798 |
Mhun_2834 | argS | Mhun_2834 | Mhun_2837 | NUDIX hydrolase. | arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.614 |
Mhun_2834 | prf1 | Mhun_2834 | Mhun_2836 | NUDIX hydrolase. | Peptide chain release factor subunit 1 (aeRF-1); Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. | 0.656 |
Mhun_2834 | queC | Mhun_2834 | Mhun_2833 | NUDIX hydrolase. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.799 |
Mhun_2834 | queE | Mhun_2834 | Mhun_2832 | NUDIX hydrolase. | Radical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.802 |
Mhun_2834 | sepS | Mhun_2834 | Mhun_2839 | NUDIX hydrolase. | phosphoserine-tRNA(Cys) ligase; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys). | 0.634 |
Mhun_2834 | taw1 | Mhun_2834 | Mhun_2838 | NUDIX hydrolase. | Radical SAM; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe). | 0.668 |
Mhun_2835 | Mhun_2831 | Mhun_2835 | Mhun_2831 | Hypothetical protein. | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. | 0.781 |
Mhun_2835 | Mhun_2834 | Mhun_2835 | Mhun_2834 | Hypothetical protein. | NUDIX hydrolase. | 0.798 |
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