STRINGSTRING
ACT00520.1 ACT00520.1 ACT00518.1 ACT00518.1 ACS99129.1 ACS99129.1 ACT00486.1 ACT00486.1 ACT00517.1 ACT00517.1 ACT00485.1 ACT00485.1 ACT02994.1 ACT02994.1 ACT03342.1 ACT03342.1 ACT03606.1 ACT03606.1 spoIIAB spoIIAB ACT00521.1 ACT00521.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ACT00520.1PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: baa:BA_1562 PP2C_SIG, sigma factor PP2C-like phosphatases. (381 aa)    
Predicted Functional Partners:
ACT00518.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bha:BH0527 positive regulator of sigma-B activity (anti-anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
 
 0.985
ACS99129.1
Multi-sensor hybrid histidine kinase; KEGG: dat:HRM2_43550 putative two-component system sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; Hpt domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein.
 
  
0.962
ACT00486.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: bha:BH0528 serine-protein kinase RsbW.
 
 
 0.918
ACT00517.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: bsu:BSU04720 serine-protein kinase RsbW.
 
 
 0.910
ACT00485.1
RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; KEGG: bha:BH0529 RNA polymerase sigma factor SigB.
 
 
 0.813
ACT02994.1
KEGG: dar:Daro_1052 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; type IV pilus assembly PilZ; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
  
  
 0.801
ACT03342.1
Diguanylate cyclase; KEGG: lpc:LPC_1579 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein.
  
  
 0.801
ACT03606.1
PFAM: type IV pilus assembly PilZ.
  
  
 0.801
spoIIAB
Anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
 
 0.790
ACT00521.1
KEGG: baa:BA_1554 hypothetical protein.
  
    0.787
Your Current Organism:
Paenibacillus sp. JDR2
NCBI taxonomy Id: 324057
Other names: P. sp. JDR-2, Paenibacillus sp. JDR-2
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