STRINGSTRING
Sbal_0098 Sbal_0098 Sbal_0100 Sbal_0100 Sbal_0101 Sbal_0101 Sbal_0099 Sbal_0099 Sbal_0102 Sbal_0102
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sbal_0098KEGG: shn:Shewana3_4067 conserved hypothetical protein. (101 aa)    
Predicted Functional Partners:
Sbal_0100
KEGG: shn:Shewana3_4065 hypothetical protein.
       0.801
Sbal_0101
KEGG: shm:Shewmr7_3949 hypothetical protein.
       0.800
Sbal_0099
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: shn:Shewana3_4066 heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.773
Sbal_0102
SMART: regulatory protein, LuxR; KEGG: shn:Shewana3_4063 transcriptional regulator, LuxR family.
       0.578
Your Current Organism:
Shewanella baltica
NCBI taxonomy Id: 325240
Other names: S. baltica OS155, Shewanella baltica OS155, Shewanella baltica str. OS155, Shewanella baltica strain OS155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.