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speA speA aguA aguA Sbal_0572 Sbal_0572 argH argH Sbal_1718 Sbal_1718 Sbal_1769 Sbal_1769 gpsA gpsA Sbal_3854 Sbal_3854 pdxH pdxH Sbal_3894 Sbal_3894
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
speAArginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (637 aa)    
Predicted Functional Partners:
aguA
PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: she:Shewmr4_3288 porphyromonas-type peptidyl-arginine deiminase.
 
  
 0.962
Sbal_0572
PFAM: arginine N-succinyltransferase beta subunit; KEGG: shn:Shewana3_0611 arginine N-succinyltransferase beta subunit.
     
  0.900
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: she:Shewmr4_3705 argininosuccinate lyase.
     
 0.836
Sbal_1718
[Acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: shm:Shewmr7_2467 malonyl CoA-acyl carrier protein transacylase.
   
    0.659
Sbal_1769
PFAM: S-adenosylmethionine decarboxylase; KEGG: shn:Shewana3_1625 S-adenosylmethionine decarboxylase.
     
 0.567
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: shn:Shewana3_0054 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein.
   
    0.511
Sbal_3854
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: son:SO4136 decarboxylase, pyridoxal-dependent; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
  
 0.494
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
 
     0.485
Sbal_3894
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: she:Shewmr4_3550 arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
  
  
 0.484
Your Current Organism:
Shewanella baltica
NCBI taxonomy Id: 325240
Other names: S. baltica OS155, Shewanella baltica OS155, Shewanella baltica str. OS155, Shewanella baltica strain OS155
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