STRINGSTRING
FRAAL0362 FRAAL0362 FRAAL6574 FRAAL6574 FRAAL1878 FRAAL1878 FRAAL4194 FRAAL4194 FRAAL0934 FRAAL0934 FRAAL1318 FRAAL1318 FRAAL6415 FRAAL6415 FRAAL5334 FRAAL5334 FRAAL3888 FRAAL3888 FRAAL3925 FRAAL3925 FRAAL0771 FRAAL0771
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
FRAAL0362Putative integral membrane protein; No homology to any previously reported sequences. (373 aa)    
Predicted Functional Partners:
FRAAL6574
Anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.865
FRAAL1878
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.815
FRAAL4194
Putative hybrid sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.699
FRAAL0934
Putative anti anti-sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.653
FRAAL1318
Putative Two-component hybrid sensor and regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
  
 0.599
FRAAL6415
Hypothetical protein; No homology to any previously reported sequences.
 
 
0.598
FRAAL5334
Putative Bacteriophytochrome (Phytochrome-like protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; receptor.
 
   
 0.597
FRAAL3888
Putative anti-sigma factor antagonist (partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.
 
 
 0.587
FRAAL3925
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.569
FRAAL0771
Putative signaling protein with a PAS domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
  
  
 0.566
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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