STRINGSTRING
FRAAL2048 FRAAL2048 FRAAL2052 FRAAL2052 FRAAL2055 FRAAL2055 FRAAL2049 FRAAL2049 FRAAL2050 FRAAL2050 FRAAL2051 FRAAL2051 FRAAL2036 FRAAL2036 FRAAL2054 FRAAL2054 rffE rffE FRAAL2047 FRAAL2047 FRAAL2046 FRAAL2046
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL2048Hypothetical protein; No homology to any previously reported sequences. (685 aa)    
Predicted Functional Partners:
FRAAL2052
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
     0.931
FRAAL2055
Putatve zinc-binding dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.874
FRAAL2049
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.779
FRAAL2050
Putative mannosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.779
FRAAL2051
Hypothetical protein; No homology to any previously reported sequences.
       0.779
FRAAL2036
Putative bi-domain oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.758
FRAAL2054
Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     0.699
rffE
UDP-N-acetyl glucosamine-2-epimerase; Function of strongly homologous gene; enzyme; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
     0.692
FRAAL2047
Hypothetical protein; No homology to any previously reported sequences.
 
     0.666
FRAAL2046
Putative Glycosyl transferase-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.623
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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