STRINGSTRING
FRAAL5147 FRAAL5147 FRAAL5146 FRAAL5146 FRAAL5224 FRAAL5224 pdhA pdhA pdhB pdhB FRAAL5081 FRAAL5081 FRAAL6755 FRAAL6755 FRAAL6510 FRAAL6510 FRAAL5144 FRAAL5144 FRAAL4277 FRAAL4277 FRAAL5143 FRAAL5143
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRAAL5147Hypothetical protein; No homology to any previously reported sequences. (417 aa)    
Predicted Functional Partners:
FRAAL5146
Hypothetical protein; No homology to any previously reported sequences.
 
    0.965
FRAAL5224
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.763
pdhA
Pyruvate dehydrogenase E1 component, alpha subunit; Function of strongly homologous gene; enzyme.
  
 0.724
pdhB
Pyruvate dehydrogenase, beta subunit (Lipoamide). (pdhB-2); Function of strongly homologous gene; enzyme.
  
 0.724
FRAAL5081
Putative Serine/threonine-protein kinase PK-1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.709
FRAAL6755
Putative serine/threonine-protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
 
 0.709
FRAAL6510
Hypothetical protein; No homology to any previously reported sequences.
  
     0.659
FRAAL5144
Hypothetical protein; No homology to any previously reported sequences.
     
 0.611
FRAAL4277
Hypothetical protein; No homology to any previously reported sequences.
   
 0.580
FRAAL5143
Hypothetical protein; No homology to any previously reported sequences.
       0.574
Your Current Organism:
Frankia alni
NCBI taxonomy Id: 326424
Other names: F. alni ACN14a, Frankia alni ACN14a, Frankia alni str. ACN14a, Frankia alni strain ACN14a, Frankia sp. ACN14a
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