Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AM1_0667 | AM1_0668 | AM1_0667 | AM1_0668 | DnaJ domain protein, putative. | Peptidase, M50 family. | 0.750 |
AM1_0667 | AM1_2057 | AM1_0667 | AM1_2057 | DnaJ domain protein, putative. | DnaK family protein; Belongs to the heat shock protein 70 family. | 0.965 |
AM1_0667 | AM1_2164 | AM1_0667 | AM1_2164 | DnaJ domain protein, putative. | WD-repeat protein. | 0.999 |
AM1_0667 | AM1_3152 | AM1_0667 | AM1_3152 | DnaJ domain protein, putative. | Oxidoreductase, putative; Has high similarity to NADPH oxidase from humans. | 0.694 |
AM1_0667 | AM1_4747 | AM1_0667 | AM1_4747 | DnaJ domain protein, putative. | Conserved hypothetical protein. | 0.999 |
AM1_0667 | AM1_5927 | AM1_0667 | AM1_5927 | DnaJ domain protein, putative. | Heat shock protein HtpG; Molecular chaperone. Has ATPase activity. | 0.996 |
AM1_0667 | dnaK | AM1_0667 | AM1_0422 | DnaJ domain protein, putative. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.970 |
AM1_0667 | dnaK-2 | AM1_0667 | AM1_2440 | DnaJ domain protein, putative. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.970 |
AM1_0667 | dnaK-3 | AM1_0667 | AM1_5692 | DnaJ domain protein, putative. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.969 |
AM1_0667 | ndk | AM1_0667 | AM1_3733 | DnaJ domain protein, putative. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.682 |
AM1_0668 | AM1_0667 | AM1_0668 | AM1_0667 | Peptidase, M50 family. | DnaJ domain protein, putative. | 0.750 |
AM1_0668 | AM1_2164 | AM1_0668 | AM1_2164 | Peptidase, M50 family. | WD-repeat protein. | 0.449 |
AM1_0668 | AM1_4747 | AM1_0668 | AM1_4747 | Peptidase, M50 family. | Conserved hypothetical protein. | 0.449 |
AM1_2057 | AM1_0667 | AM1_2057 | AM1_0667 | DnaK family protein; Belongs to the heat shock protein 70 family. | DnaJ domain protein, putative. | 0.965 |
AM1_2057 | AM1_5927 | AM1_2057 | AM1_5927 | DnaK family protein; Belongs to the heat shock protein 70 family. | Heat shock protein HtpG; Molecular chaperone. Has ATPase activity. | 0.960 |
AM1_2057 | ndk | AM1_2057 | AM1_3733 | DnaK family protein; Belongs to the heat shock protein 70 family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.433 |
AM1_2164 | AM1_0667 | AM1_2164 | AM1_0667 | WD-repeat protein. | DnaJ domain protein, putative. | 0.999 |
AM1_2164 | AM1_0668 | AM1_2164 | AM1_0668 | WD-repeat protein. | Peptidase, M50 family. | 0.449 |
AM1_2164 | AM1_3152 | AM1_2164 | AM1_3152 | WD-repeat protein. | Oxidoreductase, putative; Has high similarity to NADPH oxidase from humans. | 0.798 |
AM1_2164 | AM1_4747 | AM1_2164 | AM1_4747 | WD-repeat protein. | Conserved hypothetical protein. | 0.506 |
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