STRINGSTRING
psmB2 psmB2 psmA psmA Pars_2085 Pars_2085 psmB1 psmB1 rpl40e rpl40e Pars_1704 Pars_1704 Pars_2135 Pars_2135 Pars_1658 Pars_1658 Pars_2346 Pars_2346 eIF5A eIF5A rpl4 rpl4
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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psmB2Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (203 aa)    
Predicted Functional Partners:
psmA
Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
 
0.929
Pars_2085
KEGG: pai:PAE2024 hypothetical protein.
   
 0.912
psmB1
Proteasome endopeptidase complex, beta component, Threonine peptidase, MEROPS family T01A; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
  
 
0.906
rpl40e
PFAM: Ribosomal protein L40e; KEGG: pis:Pisl_0479 ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.774
Pars_1704
TIGRFAM: thermosome; PFAM: chaperonin Cpn60/TCP-1; KEGG: pis:Pisl_0501 thermosome.
 
 
 0.736
Pars_2135
TIGRFAM: thermosome; PFAM: chaperonin Cpn60/TCP-1; KEGG: pai:PAE2117 thermosome (chaperonin) alpha subunit.
 
 
 0.736
Pars_1658
KEGG: pai:PAE3171 AAA family ATPase, possible cell division control protein cdc48; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein domain protein; AAA ATPase, central domain protein; cell division protein 48, CDC48, domain 2; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
 0.728
Pars_2346
KEGG: pai:PAE0696 AAA family ATPase, possible cell division control protein cdc48; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein domain protein; AAA ATPase, central domain protein; cell division protein 48, CDC48, domain 2; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
 0.728
eIF5A
Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
  
 
 0.706
rpl4
LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel.
 
 
 
 0.702
Your Current Organism:
Pyrobaculum arsenaticum
NCBI taxonomy Id: 340102
Other names: P. arsenaticum DSM 13514, Pyrobaculum arsenaticum DSM 13514, Pyrobaculum arsenaticum str. DSM 13514, Pyrobaculum arsenaticum strain DSM 13514
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