Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cag_0317 | Cag_0359 | Cag_0317 | Cag_0359 | Citrate synthase; Belongs to the citrate synthase family. | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.827 |
| Cag_0317 | Cag_0366 | Cag_0317 | Cag_0366 | Citrate synthase; Belongs to the citrate synthase family. | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | 0.933 |
| Cag_0317 | Cag_0796 | Cag_0317 | Cag_0796 | Citrate synthase; Belongs to the citrate synthase family. | ATP citrate lyase subunit 1. | 0.972 |
| Cag_0317 | Cag_0797 | Cag_0317 | Cag_0797 | Citrate synthase; Belongs to the citrate synthase family. | ATP citrate lyase subunit 2. | 0.948 |
| Cag_0317 | Cag_1730 | Cag_0317 | Cag_1730 | Citrate synthase; Belongs to the citrate synthase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.949 |
| Cag_0317 | Cag_1754 | Cag_0317 | Cag_1754 | Citrate synthase; Belongs to the citrate synthase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.425 |
| Cag_0317 | acsA | Cag_0317 | Cag_1685 | Citrate synthase; Belongs to the citrate synthase family. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.955 |
| Cag_0359 | Cag_0317 | Cag_0359 | Cag_0317 | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Citrate synthase; Belongs to the citrate synthase family. | 0.827 |
| Cag_0359 | Cag_0366 | Cag_0359 | Cag_0366 | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | 0.915 |
| Cag_0359 | Cag_0796 | Cag_0359 | Cag_0796 | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | ATP citrate lyase subunit 1. | 0.917 |
| Cag_0359 | Cag_0797 | Cag_0359 | Cag_0797 | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | ATP citrate lyase subunit 2. | 0.932 |
| Cag_0359 | Cag_1229 | Cag_0359 | Cag_1229 | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.903 |
| Cag_0359 | Cag_1730 | Cag_0359 | Cag_1730 | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.919 |
| Cag_0359 | Cag_1898 | Cag_0359 | Cag_1898 | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.903 |
| Cag_0359 | acsA | Cag_0359 | Cag_1685 | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.924 |
| Cag_0359 | leuA | Cag_0359 | Cag_1673 | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.903 |
| Cag_0366 | Cag_0317 | Cag_0366 | Cag_0317 | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | Citrate synthase; Belongs to the citrate synthase family. | 0.933 |
| Cag_0366 | Cag_0359 | Cag_0366 | Cag_0359 | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.915 |
| Cag_0366 | Cag_0796 | Cag_0366 | Cag_0796 | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | ATP citrate lyase subunit 1. | 0.945 |
| Cag_0366 | Cag_0797 | Cag_0366 | Cag_0797 | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | ATP citrate lyase subunit 2. | 0.961 |
page 1 of 5