lpxA protein (Rickettsia bellii RML369)

STRING 9.05

lpxA protein (Rickettsia bellii RML369) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	lpxA	UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity) (281 aa)
		(Rickettsia bellii RML369)
Predicted Functional Partners:
	fabZ	(3R)-hydroxymyristoyl-ACP dehydratase; Involved in saturated fatty acids biosynthesis (145 aa)	•	•		•			•		0.999
	lpxC	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Involved in the biosynthesis of l [...] (288 aa)	•		•			•	•		0.998
	lpxD	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (342 aa)	•		•	•	•		•	•	0.994
	lpxB	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosa [...] (381 aa)	•		•	•			•		0.992
	glmU	UDP-N-acetylglucosamine pyrophosphorylase (265 aa)	•	•				•	•		0.985
	waaA	3-deoxy-D-manno-octulosonic-acid transferase; Essential step in lipopolysaccharides biosynthesi [...] (418 aa)	•		•				•		0.965
	murA	UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP [...] (419 aa)	•			•		•	•		0.957
	lpxK	tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a t [...] (321 aa)	•		•				•		0.955
	omp1	Outer membrane protein omp1 (768 aa)	•			•			•		0.945
	kdsB	3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for [...] (244 aa)	•		•				•		0.931

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: medium (79%)

Permalink