Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
amb0220 | amb0322 | amb0220 | amb0322 | Methyl-accepting chemotaxis protein. | Methylase of chemotaxis methyl-accepting protein. | 0.831 |
amb0220 | amb0325 | amb0220 | amb0325 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.871 |
amb0220 | amb0326 | amb0220 | amb0326 | Methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase and related kinase. | 0.913 |
amb0220 | amb1466 | amb0220 | amb1466 | Methyl-accepting chemotaxis protein. | Predicted ATPase. | 0.629 |
amb0220 | amb1947 | amb0220 | amb1947 | Methyl-accepting chemotaxis protein. | Predicted ATPase. | 0.629 |
amb0220 | amb3004 | amb0220 | amb3004 | Methyl-accepting chemotaxis protein. | Gliding motility regulatory protein. | 0.892 |
amb0220 | amb3329 | amb0220 | amb3329 | Methyl-accepting chemotaxis protein. | Hypothetical 1041 kDa protein in hypE 3'region. | 0.723 |
amb0220 | amb3654 | amb0220 | amb3654 | Methyl-accepting chemotaxis protein. | Hypothetical 1041 kDa protein in hypE 3'region. | 0.664 |
amb0220 | cheB1 | amb0220 | amb0323 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.819 |
amb0220 | cheB3 | amb0220 | amb3002 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.663 |
amb0322 | amb0220 | amb0322 | amb0220 | Methylase of chemotaxis methyl-accepting protein. | Methyl-accepting chemotaxis protein. | 0.831 |
amb0322 | amb0325 | amb0322 | amb0325 | Methylase of chemotaxis methyl-accepting protein. | Chemotaxis signal transduction protein. | 0.965 |
amb0322 | amb0326 | amb0322 | amb0326 | Methylase of chemotaxis methyl-accepting protein. | Chemotaxis protein histidine kinase and related kinase. | 0.960 |
amb0322 | amb1466 | amb0322 | amb1466 | Methylase of chemotaxis methyl-accepting protein. | Predicted ATPase. | 0.599 |
amb0322 | amb1947 | amb0322 | amb1947 | Methylase of chemotaxis methyl-accepting protein. | Predicted ATPase. | 0.599 |
amb0322 | amb3004 | amb0322 | amb3004 | Methylase of chemotaxis methyl-accepting protein. | Gliding motility regulatory protein. | 0.918 |
amb0322 | amb3329 | amb0322 | amb3329 | Methylase of chemotaxis methyl-accepting protein. | Hypothetical 1041 kDa protein in hypE 3'region. | 0.585 |
amb0322 | amb3654 | amb0322 | amb3654 | Methylase of chemotaxis methyl-accepting protein. | Hypothetical 1041 kDa protein in hypE 3'region. | 0.588 |
amb0322 | cheB1 | amb0322 | amb0323 | Methylase of chemotaxis methyl-accepting protein. | Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.988 |
amb0322 | cheB3 | amb0322 | amb3002 | Methylase of chemotaxis methyl-accepting protein. | Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.938 |
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