STRINGSTRING
amb1947 amb1947 amb3329 amb3329 amb1946 amb1946 amb1432 amb1432 amb3654 amb3654 amb3450 amb3450 amb1956 amb1956 amb2930 amb2930 amb2932 amb2932 amb3878 amb3878 amb1110 amb1110
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1947Predicted ATPase. (1959 aa)    
Predicted Functional Partners:
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
 
 0.979
amb1946
Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 
 0.968
amb1432
Signal transduction histidine kinase.
 
 
 0.966
amb3654
Hypothetical 1041 kDa protein in hypE 3'region.
 
 
 0.964
amb3450
Signal transduction histidine kinase.
 
 0.958
amb1956
Signal transduction histidine kinase.
 
 
 0.954
amb2930
Sensor protein barA.
 
 
 0.954
amb2932
Methylase of chemotaxis methyl-accepting protein.
 
 
 0.953
amb3878
Sensor protein gacS.
 
 0.944
amb1110
Signal transduction histidine kinase.
 
 
 0.937
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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