STRINGSTRING
amb2936 amb2936 amb3329 amb3329 amb1432 amb1432 amb2932 amb2932 amb3654 amb3654 amb2930 amb2930 amb3450 amb3450 amb1956 amb1956 amb1110 amb1110 amb3878 amb3878 amb1967 amb1967
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2936Predicted ATPase. (1979 aa)    
Predicted Functional Partners:
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
 
 
 0.976
amb1432
Signal transduction histidine kinase.
 
 
 0.974
amb2932
Methylase of chemotaxis methyl-accepting protein.
 
 
 0.968
amb3654
Hypothetical 1041 kDa protein in hypE 3'region.
 
 
 0.964
amb2930
Sensor protein barA.
 
 
 0.963
amb3450
Signal transduction histidine kinase.
 
 0.958
amb1956
Signal transduction histidine kinase.
 
 
 0.954
amb1110
Signal transduction histidine kinase.
 
 
 0.945
amb3878
Sensor protein gacS.
 
 0.945
amb1967
Signal transduction histidine kinase.
 
 0.940
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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