STRINGSTRING
amb3520 amb3520 amb3519 amb3519 amb1117 amb1117 amb0333 amb0333 amb1110 amb1110 amb0334 amb0334 amb0579 amb0579 amb0853 amb0853 amb2657 amb2657 amb3353 amb3353 amb1432 amb1432
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3520Serine phosphatase RsbU, regulator of sigma subunit. (899 aa)    
Predicted Functional Partners:
amb3519
Anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.998
amb1117
Anti-anti-sigma regulatory factor; (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
 
 0.992
amb0333
Anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.986
amb1110
Signal transduction histidine kinase.
 
  
 0.970
amb0334
Serine phosphatase RsbU; Regulator of sigma subunit.
 
 
0.969
amb0579
Anti-anti-sigma regulatory factor.
  
 
 0.969
amb0853
Hypothetical protein.
  
 
 0.969
amb2657
Hypothetical protein.
  
 
 0.969
amb3353
Anti-anti-sigma regulatory factor; Antagonist of anti-sigma factor.
  
 
 0.969
amb1432
Signal transduction histidine kinase.
 
  
 0.964
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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