Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCH_00153 | HCH_02986 | HCH_00153 | HCH_02986 | Peroxiredoxin; COG0678. | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | 0.930 |
HCH_00153 | HCH_03199 | HCH_00153 | HCH_03199 | Peroxiredoxin; COG0678. | Glutathione S-transferase; COG0625. | 0.928 |
HCH_00153 | HCH_03323 | HCH_00153 | HCH_03323 | Peroxiredoxin; COG0678. | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | 0.942 |
HCH_00153 | HCH_06285 | HCH_00153 | HCH_06285 | Peroxiredoxin; COG0678. | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | 0.916 |
HCH_00153 | HCH_06491 | HCH_00153 | HCH_06491 | Peroxiredoxin; COG0678. | Glutathione S-transferase; COG0625. | 0.916 |
HCH_00153 | HCH_06697 | HCH_00153 | HCH_06697 | Peroxiredoxin; COG0678. | Glutathione S-transferase; COG0625. | 0.916 |
HCH_00153 | HCH_06725 | HCH_00153 | HCH_06725 | Peroxiredoxin; COG0678. | Glutathione S-transferase; COG0625. | 0.930 |
HCH_00153 | gor | HCH_00153 | HCH_03925 | Peroxiredoxin; COG0678. | Glutathione-disulfide reductase; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzyme COG1249. | 0.952 |
HCH_00153 | gshB | HCH_00153 | HCH_00547 | Peroxiredoxin; COG0678. | Glutathione synthetase; TIGRFAMsMatches:TIGR01380; Belongs to the prokaryotic GSH synthase family. | 0.931 |
HCH_02020 | HCH_06725 | HCH_02020 | HCH_06725 | Predicted transcriptional regulator; COG2378. | Glutathione S-transferase; COG0625. | 0.919 |
HCH_02986 | HCH_00153 | HCH_02986 | HCH_00153 | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | Peroxiredoxin; COG0678. | 0.930 |
HCH_02986 | HCH_03199 | HCH_02986 | HCH_03199 | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | Glutathione S-transferase; COG0625. | 0.913 |
HCH_02986 | HCH_03323 | HCH_02986 | HCH_03323 | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | 0.918 |
HCH_02986 | HCH_06285 | HCH_02986 | HCH_06285 | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | 0.914 |
HCH_02986 | HCH_06491 | HCH_02986 | HCH_06491 | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | Glutathione S-transferase; COG0625. | 0.905 |
HCH_02986 | HCH_06697 | HCH_02986 | HCH_06697 | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | Glutathione S-transferase; COG0625. | 0.900 |
HCH_02986 | HCH_06725 | HCH_02986 | HCH_06725 | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | Glutathione S-transferase; COG0625. | 0.962 |
HCH_02986 | gor | HCH_02986 | HCH_03925 | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | Glutathione-disulfide reductase; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzyme COG1249. | 0.913 |
HCH_02986 | gshB | HCH_02986 | HCH_00547 | Glutathione S-transferase; COG0625; Belongs to the GST superfamily. | Glutathione synthetase; TIGRFAMsMatches:TIGR01380; Belongs to the prokaryotic GSH synthase family. | 0.914 |
HCH_03199 | HCH_00153 | HCH_03199 | HCH_00153 | Glutathione S-transferase; COG0625. | Peroxiredoxin; COG0678. | 0.928 |
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