STRINGSTRING
glsA glsA Amuc_1253 Amuc_1253 Amuc_0372 Amuc_0372 Amuc_0037 Amuc_0037 Amuc_2066 Amuc_2066 Amuc_2051 Amuc_2051 Amuc_0458 Amuc_0458 Amuc_0535 Amuc_0535 carB carB murD murD carA carA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAPFAM: Glutaminase, core; KEGG: bcs:BCAN_B0342 glutaminase; Belongs to the glutaminase family. (313 aa)    
Predicted Functional Partners:
Amuc_1253
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: aba:Acid345_3680 glutamate synthase (ferredoxin).
     
 0.948
Amuc_0372
TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: sbo:SBO_1563 glutamate decarboxylase isozyme; Belongs to the group II decarboxylase family.
  
 
 0.931
Amuc_0037
PFAM: amino acid permease-associated region; KEGG: bmf:BAB2_0864 aromatic amino acid permease:amino acid/polyamine transporter, family I:domain found in permeases.
  
 0.930
Amuc_2066
PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase_; KEGG: pcu:pc0033 putative bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase); Belongs to the aldehyde dehydrogenase family.
    
 0.928
Amuc_2051
Glutamate dehydrogenase (NADP(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: mvn:Mevan_1556 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.910
Amuc_0458
PFAM: glutamine amidotransferase class-II; KEGG: gfo:GFO_3378 amidophosphoribosyltransferase.
     
  0.900
Amuc_0535
Phosphoribosylformylglycinamidine synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: deb:DehaBAV1_0360 phosphoribosylformylglycinamidine synthase I.
     
  0.900
carB
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; ATP-grasp domain protein; KEGG: sat:SYN_02589 carbamoyl phosphate synthase large subunit; Belongs to the CarB family.
     
  0.900
murD
UDP-N-acetylmuramoylalanine/D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
     
 0.900
carA
TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: dol:Dole_0120 carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
     
  0.900
Your Current Organism:
Akkermansia muciniphila
NCBI taxonomy Id: 349741
Other names: A. muciniphila ATCC BAA-835, Akkermansia muciniphila ATCC BAA-835, Akkermansia muciniphila Muc, Akkermansia muciniphila str. ATCC BAA-835, Akkermansia muciniphila strain ATCC BAA-835, Akkermansia sp. Muc
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.