STRINGSTRING
Maqu_1479 Maqu_1479 Maqu_1478 Maqu_1478 Maqu_1987 Maqu_1987 Maqu_2241 Maqu_2241 Maqu_1996 Maqu_1996 Maqu_1110 Maqu_1110 Maqu_1102 Maqu_1102 Maqu_1995 Maqu_1995 Maqu_1111 Maqu_1111 Maqu_1992 Maqu_1992 Maqu_1986 Maqu_1986
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Maqu_1479PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: hch:HCH_02761 serine phosphatase RsbU, regulator of sigma subunit. (402 aa)    
Predicted Functional Partners:
Maqu_1478
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: hch:HCH_02762 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
 
 
 0.995
Maqu_1987
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.990
Maqu_2241
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: hch:HCH_01804 signal transduction histidine kinase.
 
 
 0.990
Maqu_1996
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.988
Maqu_1110
KEGG: hch:HCH_04474 muramidase (flagellum-specific); TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.
   
  
 0.984
Maqu_1102
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.982
Maqu_1995
PFAM: flagellar assembly protein FliH; KEGG: hch:HCH_05191 putative flagellar assembly protein.
  
  
 0.969
Maqu_1111
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: hch:HCH_04473 flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
  
  
 0.966
Maqu_1992
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: hch:HCH_05187 protein containing STAS (sulphate transporter and AntiSigma factor antagonist) domain.
 
 
 0.944
Maqu_1986
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
  
 0.923
Your Current Organism:
Marinobacter hydrocarbonoclasticus
NCBI taxonomy Id: 351348
Other names: M. hydrocarbonoclasticus VT8, Marinobacter aquaeolei VT8, Marinobacter aquaeolei str. VT8, Marinobacter aquaeolei strain VT8, Marinobacter hydrocarbonoclasticus VT8
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