Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ90816.1 | ABQ91539.1 | RoseRS_2439 | RoseRS_3178 | Hypothetical protein. | PFAM: protein of unknown function YGGT. | 0.514 |
ABQ90816.1 | ABQ92139.1 | RoseRS_2439 | RoseRS_3785 | Hypothetical protein. | TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. | 0.426 |
ABQ90816.1 | ABQ92146.1 | RoseRS_2439 | RoseRS_3792 | Hypothetical protein. | Polypeptide-transport-associated domain protein, FtsQ-type; Essential cell division protein. | 0.933 |
ABQ90816.1 | ddl | RoseRS_2439 | RoseRS_3791 | Hypothetical protein. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.796 |
ABQ90816.1 | ftsZ | RoseRS_2439 | RoseRS_3794 | Hypothetical protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.978 |
ABQ90816.1 | murC | RoseRS_2439 | RoseRS_3788 | Hypothetical protein. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.535 |
ABQ90816.1 | murG | RoseRS_2439 | RoseRS_3786 | Hypothetical protein. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.428 |
ABQ91539.1 | ABQ90816.1 | RoseRS_3178 | RoseRS_2439 | PFAM: protein of unknown function YGGT. | Hypothetical protein. | 0.514 |
ABQ91539.1 | ABQ92146.1 | RoseRS_3178 | RoseRS_3792 | PFAM: protein of unknown function YGGT. | Polypeptide-transport-associated domain protein, FtsQ-type; Essential cell division protein. | 0.484 |
ABQ91539.1 | ftsA | RoseRS_3178 | RoseRS_3793 | PFAM: protein of unknown function YGGT. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.504 |
ABQ91539.1 | ftsZ | RoseRS_3178 | RoseRS_3794 | PFAM: protein of unknown function YGGT. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.754 |
ABQ92139.1 | ABQ90816.1 | RoseRS_3785 | RoseRS_2439 | TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. | Hypothetical protein. | 0.426 |
ABQ92139.1 | ABQ92146.1 | RoseRS_3785 | RoseRS_3792 | TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. | Polypeptide-transport-associated domain protein, FtsQ-type; Essential cell division protein. | 0.904 |
ABQ92139.1 | ddl | RoseRS_3785 | RoseRS_3791 | TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.914 |
ABQ92139.1 | ftsA | RoseRS_3785 | RoseRS_3793 | TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.907 |
ABQ92139.1 | ftsZ | RoseRS_3785 | RoseRS_3794 | TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.818 |
ABQ92139.1 | murB | RoseRS_3785 | RoseRS_3790 | TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.886 |
ABQ92139.1 | murC | RoseRS_3785 | RoseRS_3788 | TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.970 |
ABQ92139.1 | murG | RoseRS_3785 | RoseRS_3786 | TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.975 |
ABQ92146.1 | ABQ90816.1 | RoseRS_3792 | RoseRS_2439 | Polypeptide-transport-associated domain protein, FtsQ-type; Essential cell division protein. | Hypothetical protein. | 0.933 |
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