Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAV0127 | BAV0130 | BAV0127 | BAV0130 | Putative exported protein; Unique to Bordetellae. | Putative membrane protein. | 0.531 |
BAV0127 | BAV0131 | BAV0127 | BAV0131 | Putative exported protein; Unique to Bordetellae. | Probable ATP-binding component of ABC transporter. | 0.531 |
BAV0127 | BAV0134 | BAV0127 | BAV0134 | Putative exported protein; Unique to Bordetellae. | Conserved hypothetical protein. | 0.463 |
BAV0127 | baf | BAV0127 | BAV0128 | Putative exported protein; Unique to Bordetellae. | Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.754 |
BAV0127 | birA | BAV0127 | BAV0129 | Putative exported protein; Unique to Bordetellae. | BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-CoA-carboxylase] synthetase. | 0.746 |
BAV0130 | BAV0127 | BAV0130 | BAV0127 | Putative membrane protein. | Putative exported protein; Unique to Bordetellae. | 0.531 |
BAV0130 | BAV0131 | BAV0130 | BAV0131 | Putative membrane protein. | Probable ATP-binding component of ABC transporter. | 0.998 |
BAV0130 | BAV0134 | BAV0130 | BAV0134 | Putative membrane protein. | Conserved hypothetical protein. | 0.680 |
BAV0130 | baf | BAV0130 | BAV0128 | Putative membrane protein. | Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.566 |
BAV0130 | birA | BAV0130 | BAV0129 | Putative membrane protein. | BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-CoA-carboxylase] synthetase. | 0.566 |
BAV0131 | BAV0127 | BAV0131 | BAV0127 | Probable ATP-binding component of ABC transporter. | Putative exported protein; Unique to Bordetellae. | 0.531 |
BAV0131 | BAV0130 | BAV0131 | BAV0130 | Probable ATP-binding component of ABC transporter. | Putative membrane protein. | 0.998 |
BAV0131 | BAV0134 | BAV0131 | BAV0134 | Probable ATP-binding component of ABC transporter. | Conserved hypothetical protein. | 0.686 |
BAV0131 | baf | BAV0131 | BAV0128 | Probable ATP-binding component of ABC transporter. | Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.566 |
BAV0131 | birA | BAV0131 | BAV0129 | Probable ATP-binding component of ABC transporter. | BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-CoA-carboxylase] synthetase. | 0.570 |
BAV0134 | BAV0127 | BAV0134 | BAV0127 | Conserved hypothetical protein. | Putative exported protein; Unique to Bordetellae. | 0.463 |
BAV0134 | BAV0130 | BAV0134 | BAV0130 | Conserved hypothetical protein. | Putative membrane protein. | 0.680 |
BAV0134 | BAV0131 | BAV0134 | BAV0131 | Conserved hypothetical protein. | Probable ATP-binding component of ABC transporter. | 0.686 |
BAV0134 | baf | BAV0134 | BAV0128 | Conserved hypothetical protein. | Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. | 0.710 |
BAV0134 | birA | BAV0134 | BAV0129 | Conserved hypothetical protein. | BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-CoA-carboxylase] synthetase. | 0.651 |
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