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cbbM cbbM Pnap_1976 Pnap_1976 Pnap_1985 Pnap_1985 Pnap_1983 Pnap_1983 Pnap_3084 Pnap_3084 gph gph Pnap_2974 Pnap_2974 Pnap_1977 Pnap_1977 Pnap_1178 Pnap_1178 Pnap_1980 Pnap_1980 Pnap_1979 Pnap_1979
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
cbbMRibulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. (459 aa)    
Predicted Functional Partners:
Pnap_1976
PFAM: von Willebrand factor, type A; KEGG: tbd:Tbd_2636 rubisco activation protein CbbO.
 
   
 0.933
Pnap_1985
TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rme:Rmet_1514 phosphoglycolate phosphatase.
    
 0.931
Pnap_1983
PFAM: phosphoribulokinase/uridine kinase; KEGG: rfr:Rfer_1392 phosphoribulokinase.
 
 
 0.923
Pnap_3084
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_3658 HAD-superfamily hydrolase, subfamily IA, variant 1.
 
  
 0.918
gph
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.915
Pnap_2974
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tpa:TP0407 phosphoglycolate phosphatase (gph-1).
     
  0.900
Pnap_1977
CbbQ/NirQ/NorQ C-terminal domain protein; PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: tbd:Tbd_2637 rubisco activation protein CbbQ.
 
   
 0.878
Pnap_1178
KEGG: pol:Bpro_3188 transferase hexapeptide repeat.
    
 
 0.818
Pnap_1980
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B2478 HAD-superfamily hydrolase, subfamily IA, variant3.
 
   
 0.792
Pnap_1979
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rfr:Rfer_1394 transcriptional regulator, LysR family.
 
   
 0.668
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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