STRINGSTRING
pknA pknA BAD_0042 BAD_0042 BAD_0043 BAD_0043 BAD_0044 BAD_0044 pknB pknB ppp ppp garA garA rodA rodA pbpA pbpA BAD_1358 BAD_1358 pknA2 pknA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
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Experiments
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[Homology]
Score
pknACOG family: serine_threonine protein kinases; Orthologue of BL0588; PFAM_ID: pkinase. (314 aa)    
Predicted Functional Partners:
BAD_0042
Possible phosphoprotein phosphatase; COG family: protein serine_threonine phosphatases; Orthologue of BL0585.
 
 0.987
BAD_0043
Hypothetical protein; COG family: FHA-domain-containing proteins; Orthologue of BL0584; PFAM_ID: FHA.
 
 
 
 0.948
BAD_0044
Hypothetical protein; COG family: FHA-domain-containing proteins; Orthologue of BL0583; PFAM_ID: FHA.
 
 
 
 0.939
pknB
COG family: serine_threonine protein kinases; Orthologue of BL0589; PFAM_ID: pkinase.
 
 
0.931
ppp
Probable phosphoprotein phosphatase; COG family: protein serine_threoninephosphatases; Orthologue of BL1202; PFAM_ID: PP2C.
 
 0.924
garA
Possible signal transduction protein; COG family: FHA-domain-containing proteins; Orthologue of BL0747; PFAM_ID: FHA.
 
 
 
 0.905
rodA
Protein involved in cell wall formation and stabilization of the FtsZ ring during cell division; COG family: bacterial cell divisionmembrane protein; Orthologue of BL0586; PFAM_ID: FTSW_RODA_SPOVE; Belongs to the SEDS family.
 
 
 0.896
pbpA
COG family: cell division proteinFtsI_penicillin-binding protein 2; Orthologue of BL0587; PFAM_ID:Transpeptidase.
     
 0.870
BAD_1358
Possible Etk-like tyrosine kinase involved in Eps biosynthesis; COG family: ATPases involved in chromosomepartitioning; Orthologue of BL1229.
    
   0.659
pknA2
Probable serine-threonine protein kinase pknA2; COG family: serine_threonine proteinkinases; Orthologue of BL1425; PFAM_ID: pkinase.
 
  
0.527
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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