Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aqpZ | lpdA | mma_2544 | mma_0676 | Aquaporin Z, transmembrane water channel (MIP family); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Dihydrolipoamide dehydrogenase. | 0.406 |
aqpZ | mma_2140 | mma_2544 | mma_2140 | Aquaporin Z, transmembrane water channel (MIP family); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Serine/threonine protein phosphatase. | 0.586 |
fmt | mma_0748 | mma_0144 | mma_0748 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Uncharacterized conserved protein. | 0.900 |
fmt | mma_2140 | mma_0144 | mma_2140 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Serine/threonine protein phosphatase. | 0.558 |
hstK | mma_2140 | mma_0863 | mma_2140 | Serine/threonine kinase with two-component sensor domain. | Serine/threonine protein phosphatase. | 0.544 |
hstK | mma_2857 | mma_0863 | mma_2857 | Serine/threonine kinase with two-component sensor domain. | Uncharacterized conserved protein. | 0.832 |
lpdA | aqpZ | mma_0676 | mma_2544 | Dihydrolipoamide dehydrogenase. | Aquaporin Z, transmembrane water channel (MIP family); Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.406 |
lpdA | mma_2140 | mma_0676 | mma_2140 | Dihydrolipoamide dehydrogenase. | Serine/threonine protein phosphatase. | 0.798 |
lpdA | mma_2857 | mma_0676 | mma_2857 | Dihydrolipoamide dehydrogenase. | Uncharacterized conserved protein. | 0.773 |
mma_0192 | mma_1330 | mma_0192 | mma_1330 | Uncharacterized conserved protein. | Protein kinase. | 0.480 |
mma_0192 | mma_2140 | mma_0192 | mma_2140 | Uncharacterized conserved protein. | Serine/threonine protein phosphatase. | 0.532 |
mma_0192 | mma_2857 | mma_0192 | mma_2857 | Uncharacterized conserved protein. | Uncharacterized conserved protein. | 0.560 |
mma_0748 | fmt | mma_0748 | mma_0144 | Uncharacterized conserved protein. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.900 |
mma_0748 | mma_2140 | mma_0748 | mma_2140 | Uncharacterized conserved protein. | Serine/threonine protein phosphatase. | 0.558 |
mma_1148 | mma_2140 | mma_1148 | mma_2140 | Serine/threonine protein kinase, Pkn2 family. | Serine/threonine protein phosphatase. | 0.868 |
mma_1148 | mma_2857 | mma_1148 | mma_2857 | Serine/threonine protein kinase, Pkn2 family. | Uncharacterized conserved protein. | 0.811 |
mma_1330 | mma_0192 | mma_1330 | mma_0192 | Protein kinase. | Uncharacterized conserved protein. | 0.480 |
mma_1330 | mma_2140 | mma_1330 | mma_2140 | Protein kinase. | Serine/threonine protein phosphatase. | 0.860 |
mma_1330 | mma_2857 | mma_1330 | mma_2857 | Protein kinase. | Uncharacterized conserved protein. | 0.870 |
mma_2139 | mma_2140 | mma_2139 | mma_2140 | Uncharacterized conserved protein. | Serine/threonine protein phosphatase. | 0.500 |
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