Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAU_0926 | GAU_2121 | GAU_0926 | GAU_2121 | Putative aminotransferase. | Aminotransferase. | 0.914 |
GAU_0926 | GAU_3549 | GAU_0926 | GAU_3549 | Putative aminotransferase. | DapE-ArgE family protein. | 0.900 |
GAU_0926 | dapB | GAU_0926 | GAU_1793 | Putative aminotransferase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.908 |
GAU_0926 | dapE | GAU_0926 | GAU_1611 | Putative aminotransferase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.922 |
GAU_0926 | gltB | GAU_0926 | GAU_3081 | Putative aminotransferase. | Protein synonym: GLTS alpha chain; protein synonym: glutamate synthase alpha subunit. | 0.475 |
GAU_0926 | lysA | GAU_0926 | GAU_1752 | Putative aminotransferase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.447 |
GAU_2121 | GAU_0926 | GAU_2121 | GAU_0926 | Aminotransferase. | Putative aminotransferase. | 0.914 |
GAU_2121 | GAU_3549 | GAU_2121 | GAU_3549 | Aminotransferase. | DapE-ArgE family protein. | 0.900 |
GAU_2121 | dapB | GAU_2121 | GAU_1793 | Aminotransferase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.923 |
GAU_2121 | dapE | GAU_2121 | GAU_1611 | Aminotransferase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.927 |
GAU_2121 | gltB | GAU_2121 | GAU_3081 | Aminotransferase. | Protein synonym: GLTS alpha chain; protein synonym: glutamate synthase alpha subunit. | 0.475 |
GAU_2121 | lysA | GAU_2121 | GAU_1752 | Aminotransferase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.469 |
GAU_3549 | GAU_0926 | GAU_3549 | GAU_0926 | DapE-ArgE family protein. | Putative aminotransferase. | 0.900 |
GAU_3549 | GAU_2121 | GAU_3549 | GAU_2121 | DapE-ArgE family protein. | Aminotransferase. | 0.900 |
GAU_3549 | dapE | GAU_3549 | GAU_1611 | DapE-ArgE family protein. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.906 |
asd | dapA | GAU_1795 | GAU_1792 | Protein synonym: ASA dehydrogenase; protein synonym: ASADH; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.990 |
asd | dapB | GAU_1795 | GAU_1793 | Protein synonym: ASA dehydrogenase; protein synonym: ASADH; Belongs to the aspartate-semialdehyde dehydrogenase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.948 |
asd | dapE | GAU_1795 | GAU_1611 | Protein synonym: ASA dehydrogenase; protein synonym: ASADH; Belongs to the aspartate-semialdehyde dehydrogenase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.847 |
asd | gltB | GAU_1795 | GAU_3081 | Protein synonym: ASA dehydrogenase; protein synonym: ASADH; Belongs to the aspartate-semialdehyde dehydrogenase family. | Protein synonym: GLTS alpha chain; protein synonym: glutamate synthase alpha subunit. | 0.713 |
asd | lysA | GAU_1795 | GAU_1752 | Protein synonym: ASA dehydrogenase; protein synonym: ASADH; Belongs to the aspartate-semialdehyde dehydrogenase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.411 |
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